RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 TOP3BO95985 862 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 ITIH2P19823 946 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 AKT2P31751 481 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 MAN1A1P33908 653 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 RXRGP48443 463 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 CLDN2P57739 230 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 NSUN2Q08J23 767 aaKnown RBP eCLIP18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 DPYSL3Q14195 570 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 KRT81Q14533 505 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 LRRC73Q5JTD7 316 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 GCNT7Q6ZNI0 430 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 GLRX5Q86SX6 157 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 SRLQ86TD4 932 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 HCAR2Q8TDS4 363 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 KLF6Q99612 283 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 SUV39H2Q9H5I1 410 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 LCMT1Q9UIC8 334 aa18.7■□□□□ 0.58
SHKBP1-202ENST00000593764 TSPAN11A1L157 253 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 MAGEC1O60732 1142 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 MTA2O94776 668 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 SLC10A7Q0GE19 358 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 MESDQ14696 234 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 LBRQ14739 615 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 GRM3Q14832 879 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 ABI3BPQ7Z7G0 1075 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 ZSCAN30Q86W11 494 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 CAMK1DQ8IU85 385 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 PCDH19Q8TAB3 1148 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 RHBDD1Q8TEB9 315 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 SAP25Q8TEE9 199 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 KLHDC7BQ96G42 594 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 BMFQ96LC9 184 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 ZNF641Q96N77 438 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 ZNF599Q96NL3 588 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 PSKH2Q96QS6 385 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 TUBGCP5Q96RT8 1024 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 ANGPTL2Q9UKU9 493 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 PCDHB9Q9Y5E1 797 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 HS3ST3A1Q9Y663 406 aa18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 ARID1BQ8NFD5 2236 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-202ENST00000593764 CEP295Q9C0D2 2601 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 FRYQ5TBA9 3013 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 POM121BA6NF01 834 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 TMEM110-MUSTN1A8MSY1 372 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 NEMP1O14524 444 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 THEGLP0DJG4 465 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 GJC1P36383 396 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 GRK6P43250 576 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 ZNF75DP51815 510 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 FOXC1Q12948 553 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 BNIP3Q12983 259 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 PDK2Q15119 407 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 ANKRD20A8PQ5CZ79 823 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 TMCO4Q5TGY1 634 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 ZSWIM9Q86XI8 627 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 GATAD2AQ86YP4 633 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 RHOT2Q8IXI1 618 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 KCTD6Q8NC69 237 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 OR13H1Q8NG92 308 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 ASB12Q8WXK4 309 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 LENG8Q96PV6 779 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 CINPQ9BW66 212 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 KLHL11Q9NVR0 708 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 SEPT3Q9UH03 358 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 INTUQ9ULD6 942 aa18.68■□□□□ 0.58
SHKBP1-202ENST00000593764 KRT7P08729 469 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 SERPINB6P35237 376 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 ARHGAP25P42331 645 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 SGCGQ13326 291 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 PAFAH1B3Q15102 231 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 TCEAL1Q15170 157 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 UGP2Q16851 508 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 NCBP2-AS2Q69YL0 99 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 KANSL1Q7Z3B3 1105 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 SLCO6A1Q86UG4 719 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 SLC22A18ASQ8N1D0 253 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 PGBD5Q8N414 524 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 RFFLQ8WZ73 363 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 RAPGEF5Q92565 580 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 FAF2Q96CS3 445 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 ECHDC3Q96DC8 303 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 MRFAP1L1Q96HT8 127 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 ZNF670Q9BS34 389 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 CALN1Q9BXU9 219 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 GPR27Q9NS67 375 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 TOR4AQ9NXH8 423 aa18.67■□□□□ 0.58
SHKBP1-202ENST00000593764 TTC24A2A3L6 582 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 TRAFD1O14545 582 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 YKT6O15498 198 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 MFSD11O43934 449 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 MMP20O60882 483 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 LCA5LO95447 670 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 CR2P20023 1033 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 SPINK2P20155 84 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 EPHA8P29322 1005 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 ARRB1P49407 418 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 SCNN1BP51168 640 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 RENBPP51606 427 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 SUOXP51687 545 aa18.66■□□□□ 0.58
SHKBP1-202ENST00000593764 TMEM52BQ4KMG9 183 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms