RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 SLC7A5Q01650 507 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 RPL6Q02878 288 aaKnown RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ITKQ08881 620 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 TRAF2Q12933 501 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 RSPO4Q2I0M5 234 aaPredicted RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 HNRNPA1L2Q32P51 320 aaKnown RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ANKRD20A2Q5SQ80 823 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ANKRD20A1Q5TYW2 823 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 MARC1Q5VT66 337 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ANKRD20A3Q5VUR7 823 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ANKRD22Q5VYY1 191 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 TCEAL6Q6IPX3 200 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PRR23CQ6ZRP0 262 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 KDELC2Q7Z4H8 507 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PRPF39Q86UA1 669 aaKnown RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 FAM124AQ86V42 546 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 JAMLQ86YT9 394 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 TMPRSS6Q8IU80 811 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PIGKQ92643 395 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 TCEAL3Q969E4 200 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 RMDN1Q96DB5 314 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 RTP4Q96DX8 246 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 LOXL4Q96JB6 756 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 TEKT5Q96M29 485 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PSKH2Q96QS6 385 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 RBM15Q96T37 977 aaKnown RBP eCLIP9.76□□□□□ -0.856e-8■■■■■ 29.9
DDX39A-220ENST00000593008 SEMA3CQ99985 751 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 APOL2Q9BQE5 337 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 MGME1Q9BQP7 344 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 TRIM31Q9BZY9 425 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ZDHHC6Q9H6R6 413 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 GLOD4Q9HC38 313 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PRSS16Q9NQE7 514 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 RXFP3Q9NSD7 469 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 PIH1D1Q9NWS0 290 aaKnown RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 SEPT3Q9UH03 358 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 RSPH14Q9UHP6 348 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 HPCAL4Q9UM19 191 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ATP8A1Q9Y2Q0 1164 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 WASF2Q9Y6W5 498 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 V9GYY5 206 aaPredicted RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 CKAP5Q14008 2032 aa9.76□□□□□ -0.85
DDX39A-220ENST00000593008 ATXN2Q99700 1313 aaKnown RBP9.76□□□□□ -0.85
DDX39A-220ENST00000593008 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 USP12O75317 370 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 KRT14P02533 472 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 TUBB4AP04350 444 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 ITIH2P19823 946 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CHRNA3P32297 505 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 GRIA1P42261 906 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CHRNA4P43681 627 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 FNTAP49354 379 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 SCNN1BP51168 640 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 COPAP53621 1224 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 ST8SIA6P61647 398 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 SKOR1P84550 965 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 DR1Q01658 176 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 LMNB2Q03252 620 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 SULT2A1Q06520 285 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CKAP4Q07065 602 aaKnown RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 HNRNPDQ14103 355 aaKnown RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CSRP2Q16527 193 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 PCSK7Q16549 785 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 TEX44Q53QW1 395 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CARD16Q5EG05 197 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 TIGD7Q6NT04 549 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 DRICH1Q6PGQ1 229 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 NCEH1Q6PIU2 408 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 GSTA5Q7RTV2 222 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 PID1Q7Z2X4 250 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CYP2U1Q7Z449 544 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 C11orf74Q86VG3 221 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CAMK1DQ8IU85 385 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 MMAAQ8IVH4 418 aaKnown RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 OR2AP1Q8NGE2 309 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 MAIP1Q8WWC4 291 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 PRCCQ92733 491 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 ARRDC3Q96B67 414 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 SIPA1Q96FS4 1042 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 PWWP2AQ96N64 755 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 ZNF599Q96NL3 588 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 FAM129BQ96TA1 746 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 NAP1L3Q99457 506 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 LRRC1Q9BTT6 524 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 GBA3Q9H227 469 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 HECAQ9UBI9 543 aaPredicted RBP9.75□□□□□ -0.85
DDX39A-220ENST00000593008 SERGEFQ9UGK8 458 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 PCDHGC4Q9Y5F7 938 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 DCHS1Q96JQ0 3298 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 EML5Q05BV3 1969 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 CEP250Q9BV73 2442 aa9.75□□□□□ -0.85
DDX39A-220ENST00000593008 ABCA7Q8IZY2 2146 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 LAMA1P25391 3075 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 EDDM13A0A1B0GTR0 161 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 CTAGE15A4D2H0 777 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 C5orf60A6NFR6 353 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 PATE3B3GLJ2 98 aa9.74□□□□□ -0.85
DDX39A-220ENST00000593008 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms