RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 CA9Q16790 459 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 FIGNQ5HY92 759 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 ERMARDQ5T6L9 678 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 TTC7BQ86TV6 843 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 PSTKQ8IV42 348 aaKnown RBP23.56■■□□□ 1.36
MBD3-211ENST00000592965 CACTIN-AS1Q8N1I8 211 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 NETO2Q8NC67 525 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 NXPE2Q96DL1 559 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 SNRNP25Q9BV90 132 aaKnown RBP23.56■■□□□ 1.36
MBD3-211ENST00000592965 CNOT8Q9UFF9 292 aaKnown RBP23.56■■□□□ 1.36
MBD3-211ENST00000592965 RAXQ9Y2V3 346 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 IGSF10Q6WRI0 2623 aa23.56■■□□□ 1.36
MBD3-211ENST00000592965 NEMP2A6NFY4 417 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 RNF8O76064 485 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 CSF2P04141 144 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 PFN3P60673 137 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 GRM3Q14832 879 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 NR1I3Q14994 352 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 LRRC73Q5JTD7 316 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 CYP4V2Q6ZWL3 525 aaPredicted RBP23.55■■□□□ 1.36
MBD3-211ENST00000592965 DNAAF5Q86Y56 855 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 HCAR2Q8TDS4 363 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 CENPTQ96BT3 561 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 TRIM11Q96F44 468 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 EXOC2Q96KP1 924 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 KCTD15Q96SI1 283 aaPredicted RBP23.55■■□□□ 1.36
MBD3-211ENST00000592965 TRIM7Q9C029 511 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 CAAP1Q9H8G2 361 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 PCSK1NQ9UHG2 260 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 LHX6Q9UPM6 363 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 SCINQ9Y6U3 715 aa23.55■■□□□ 1.36
MBD3-211ENST00000592965 ASXL3Q9C0F0 2248 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 TSPAN11A1L157 253 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 ARHGAP42A6NI28 874 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 H3BM21 787 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 SCAMP1O15126 338 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 INSIG1O15503 277 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 PRPSAP2O60256 369 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 SERPINC1P01008 464 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 MYBL1P10243 752 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 CKMT1AP12532 417 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 TIMP2P16035 220 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 MIPP30301 263 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 DAB2P98082 770 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 E2F1Q01094 437 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 TARDBPQ13148 414 aaKnown RBP eCLIP23.54■■□□□ 1.36
MBD3-211ENST00000592965 PDE1CQ14123 709 aaPredicted RBP23.54■■□□□ 1.36
MBD3-211ENST00000592965 ZNF542PQ5EBM4 170 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 AFMIDQ63HM1 303 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 RFX8Q6ZV50 586 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 FAM181AQ8N9Y4 354 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 ZNF548Q8NEK5 533 aaPredicted RBP23.54■■□□□ 1.36
MBD3-211ENST00000592965 ZNF653Q96CK0 615 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 CELF6Q96J87 481 aaKnown RBP23.54■■□□□ 1.36
MBD3-211ENST00000592965 NCAPGQ9BPX3 1015 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 DUSP23Q9BVJ7 150 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 C1QTNF7Q9BXJ2 289 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 ATRXP46100 2492 aa23.54■■□□□ 1.36
MBD3-211ENST00000592965 J3KR12 359 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 TM7SF2O76062 418 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 IGFALSP35858 605 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 ZNF135P52742 658 aaPredicted RBP23.53■■□□□ 1.36
MBD3-211ENST00000592965 INSM1Q01101 510 aaPredicted RBP23.53■■□□□ 1.36
MBD3-211ENST00000592965 TPRG1LQ5T0D9 272 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 CXorf40AQ8TE69 158 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 SLC39A8Q9C0K1 460 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 USP29Q9HBJ7 922 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 SCUBE2Q9NQ36 999 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 IPO11Q9UI26 975 aaKnown RBP23.53■■□□□ 1.36
MBD3-211ENST00000592965 CSNK1G3Q9Y6M4 447 aa23.53■■□□□ 1.36
MBD3-211ENST00000592965 K7ESM1 405 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 MMP20O60882 483 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 LRCH4O75427 683 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 PIGNO95427 931 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 PAPOLAP51003 745 aaKnown RBP23.52■■□□□ 1.36
MBD3-211ENST00000592965 ELP6Q0PNE2 266 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 TMEM52BQ4KMG9 183 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 VPS36Q86VN1 386 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 ARHGAP12Q8IWW6 846 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 DCBLD1Q8N8Z6 715 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 APOLD1Q96LR9 279 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 ZNF641Q96N77 438 aaPredicted RBP23.52■■□□□ 1.36
MBD3-211ENST00000592965 TUBGCP5Q96RT8 1024 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 NRSN2Q9GZP1 204 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 ISCUQ9H1K1 167 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 MRPL47Q9HD33 250 aaKnown RBP23.52■■□□□ 1.36
MBD3-211ENST00000592965 KLF15Q9UIH9 416 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 CLCA2Q9UQC9 943 aa23.52■■□□□ 1.36
MBD3-211ENST00000592965 LY6G6EA0A0G2JKS1 128 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 TOR1BO14657 336 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 DAPK3O43293 454 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 SKILP12757 684 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 ERCC2P18074 760 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 ITIH2P19823 946 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 XPAP23025 273 aaPredicted RBP23.51■■□□□ 1.35
MBD3-211ENST00000592965 PCK1P35558 622 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 CSNK1DP48730 415 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 HCAR3P49019 387 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 YPEL5P62699 121 aa23.51■■□□□ 1.35
MBD3-211ENST00000592965 EIF2B5Q13144 721 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms