RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 DYRK4Q9NR20 520 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 DKK3Q9UBP4 350 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 DNPEPQ9ULA0 475 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SNX12Q9UMY4 172 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 SMG5Q9UPR3 1016 aaKnown RBP10.05□□□□□ -0.8
TPM4-216ENST00000592822 TTLL3Q9Y4R7 772 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 PCDHGC4Q9Y5F7 938 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 GPR179Q6PRD1 2367 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 MYO15AQ9UKN7 3530 aa10.05□□□□□ -0.8
TPM4-216ENST00000592822 DOCK9Q9BZ29 2069 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 BCLAF3A2AJT9 711 aaKnown RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 TRAFD1O14545 582 aaPredicted RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 FANCGO15287 622 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 SPINT1O43278 529 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 MTSS1O43312 755 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 PLRG1O43660 514 aaKnown RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 NEBLO76041 1014 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 FGGP02679 453 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 ADRB3P13945 408 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 TIMP2P16035 220 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 CES1P23141 567 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 SERPINA4P29622 427 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 CD68P34810 354 aaPredicted RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 ABL2P42684 1182 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 PTGER3P43115 390 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 NEK3P51956 506 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 BCL2L1Q07817 233 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 TRAF2Q12933 501 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 ELF2Q15723 593 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 TEX44Q53QW1 395 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 DARS2Q6PI48 645 aaKnown RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 LPCAT2Q7L5N7 544 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 CDKL3Q8IVW4 592 aaPredicted RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 ZNF567Q8N184 647 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 RASGEF1CQ8N431 466 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 CADM4Q8NFZ8 388 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 OR2T34Q8NGX1 318 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 HCAR2Q8TDS4 363 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 COG1Q8WTW3 980 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 ECHDC3Q96DC8 303 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 MS4A14Q96JA4 679 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 PBKQ96KB5 322 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 OSBPL9Q96SU4 736 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 PCED1AQ9H1Q7 454 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 C6orf106Q9H6K1 298 aaPredicted RBP10.04□□□□□ -0.8
TPM4-216ENST00000592822 GLOD4Q9HC38 313 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 GON4LQ3T8J9 2241 aa10.04□□□□□ -0.8
TPM4-216ENST00000592822 ZFHX2Q9C0A1 2572 aaPredicted RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 FAM47DPA6NHR8 397 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 AREL1O15033 823 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 ZNF185O15231 689 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 KCNN4O15554 427 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 HTRA2O43464 458 aaPredicted RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 AP1G1O43747 822 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 LIASO43766 372 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 SOCS5O75159 536 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 RHOBTB1O94844 696 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 IGHV4-34P06331 123 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 ITIH2P19823 946 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 CD86P42081 329 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 DHPSP49366 369 aaPredicted RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 SKOR1P84550 965 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 CCDC15Q0P6D6 951 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 LONRF2Q1L5Z9 754 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 HS1BP3Q53T59 392 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 LRRC73Q5JTD7 316 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 PAPD7Q5XG87 772 aaKnown RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 KIAA0895LQ68EN5 471 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 FBXL19Q6PCT2 694 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 ARMCX6Q7L4S7 300 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 TTC7BQ86TV6 843 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 PRPF39Q86UA1 669 aaKnown RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 C1orf54Q8WWF1 131 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 SPOCK2Q92563 424 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 NKD2Q969F2 451 aaPredicted RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 RAB7BQ96AH8 199 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 TADA1Q96BN2 335 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 IMP4Q96G21 291 aaKnown RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 HSPA12BQ96MM6 686 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 VAT1Q99536 393 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 FRMD8P1Q9BZ68 369 aaPredicted RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 SLC25A51Q9H1U9 297 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 KDM4CQ9H3R0 1056 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 HAUS2Q9NVX0 235 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 SMARCAL1Q9NZC9 954 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 GGT7Q9UJ14 662 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 TTC7AQ9ULT0 858 aaPredicted RBP10.03□□□□□ -0.8
TPM4-216ENST00000592822 ITM2BQ9Y287 266 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 RAI2Q9Y5P3 530 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 FADS3Q9Y5Q0 445 aa10.03□□□□□ -0.8
TPM4-216ENST00000592822 OTOGLQ3ZCN5 2332 aa10.02□□□□□ -0.8
TPM4-216ENST00000592822 LRRK1Q38SD2 2015 aa10.02□□□□□ -0.8
TPM4-216ENST00000592822 LAMA1P25391 3075 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3DA0A087WVF3 549 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3IA0A087WXS9 549 aa10.02□□□□□ -0.81
TPM4-216ENST00000592822 TBC1D3EA0A087X179 549 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms