RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	DNAI1	Q9UI46	699 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	PADI4	Q9UM07	663 aa		18.53	■□□□□ 0.56
CIRBP-238	ENST00000592412	NOBOX	O60393	691 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	ANXA6	P08133	673 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	EIF4A3	P38919	411 aa	Known RBP	18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	MTIF2	P46199	727 aa	Known RBP	18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	RPIA	P49247	311 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	BPIFB4	P59827	614 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	YPEL5	P62699	121 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	NOMO3	P69849	1222 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	ATP11A	P98196	1134 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	SRSF6	Q13247	344 aa	Known RBP	18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	SPIDR	Q14159	915 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	PTK2B	Q14289	1009 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	C15orf59	Q2T9L4	293 aa	Predicted RBP	18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	MYLK3	Q32MK0	819 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	ZSCAN23	Q3MJ62	389 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	ARC	Q7LC44	396 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	KY	Q8NBH2	561 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	NETO2	Q8NC67	525 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	WDR48	Q8TAF3	677 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	CPA5	Q8WXQ8	436 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	EPAS1	Q99814	870 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	NAA15	Q9BXJ9	866 aa	Known RBP	18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	PDCL3	Q9H2J4	239 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	CLMP	Q9H6B4	373 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	METTL5	Q9NRN9	209 aa	Known RBP	18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	TMEM248	Q9NWD8	314 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	KIAA1468	Q9P260	1216 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	OR12D3	Q9UGF7	316 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	LRP4	O75096	1905 aa		18.52	■□□□□ 0.56
CIRBP-238	ENST00000592412	POP4	O95707	220 aa	Known RBP	18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	RHOQ	P17081	205 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	ADRA1B	P35368	520 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	MAPKAPK2	P49137	400 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	RAPGEF1	Q13905	1077 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	MAN2A1	Q16706	1144 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	KLHL40	Q2TBA0	621 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	LINC00303	Q3SY05	128 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	KCTD16	Q68DU8	428 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	GDPD4	Q6W3E5	623 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	GLMN	Q92990	594 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	ARHGEF26	Q96DR7	871 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	CCNL2	Q96S94	520 aa	Predicted RBP	18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	OSBPL1A	Q9BXW6	950 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	SLC13A1	Q9BZW2	595 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	NOL6	Q9H6R4	1146 aa	Known RBP	18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	SYNDIG1	Q9H7V2	258 aa		18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	18.51	■□□□□ 0.55
CIRBP-238	ENST00000592412	LRRK1	Q38SD2	2015 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412		A0A1W2PQM1	296 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	PLD2	O14939	933 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	SLC28A2	O43868	658 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	TM7SF2	O76062	418 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	LRIG2	O94898	1065 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	LSM8	O95777	96 aa	Known RBP	18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	MME	P08473	750 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	HGF	P14210	728 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	TIMP2	P16035	220 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	SLC5A2	P31639	672 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	ETFB	P38117	255 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	SNRPD1	P62314	119 aa	Known RBP	18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	PPARD	Q03181	441 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	POLD3	Q15054	466 aa	Predicted RBP	18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	IRF4	Q15306	451 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	TCEA2	Q15560	299 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	TGIF1	Q15583	401 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	CDO1	Q16878	200 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	ALG11	Q2TAA5	492 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	CCDC14	Q49A88	953 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	FAXC	Q5TGI0	409 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	KLHDC7A	Q5VTJ3	777 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	RWDD4	Q6NW29	188 aa	Known RBP	18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	TTC7B	Q86TV6	843 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	ARL10	Q8N8L6	244 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	PCDH19	Q8TAB3	1148 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	EPS8L1	Q8TE68	723 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	CCDC74A	Q96AQ1	378 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	WRAP53	Q9BUR4	548 aa	Known RBP	18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	FOXP3	Q9BZS1	431 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	KLC2	Q9H0B6	622 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	MAGEH1	Q9H213	219 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	NDST4	Q9H3R1	872 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	PCDHGA7	Q9Y5G6	932 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412	SCN8A	Q9UQD0	1980 aa		18.5	■□□□□ 0.55
CIRBP-238	ENST00000592412		D6RAR5	112 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	TMCC1	O94876	653 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	GJB6	O95452	261 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	UGT1A5	P35504	534 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	HK3	P52790	923 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	GEMIN4	P57678	1058 aa	Known RBP	18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	CCL7	P80098	99 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	CAMK4	Q16566	473 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	NAA35	Q5VZE5	725 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	ESRP1	Q6NXG1	681 aa	Known RBP	18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	CCDC185	Q8N715	623 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	JOSD2	Q8TAC2	188 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	CXorf40A	Q8TE69	158 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	RXFP2	Q8WXD0	754 aa		18.49	■□□□□ 0.55
CIRBP-238	ENST00000592412	TSACC	Q96A04	125 aa	Predicted RBP	18.49	■□□□□ 0.55

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