RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TTC24A2A3L6 582 aaPredicted RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 PGM1P36871 562 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 POU4F1Q01851 419 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 LBRQ14739 615 aaKnown RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 KPNB1Q14974 876 aaKnown RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 SIRPB2Q5JXA9 342 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 RBM20Q5T481 1227 aaKnown RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 CNSTQ6PJW8 725 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 GALNT7Q86SF2 657 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 ZNF354CQ86Y25 554 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 ARHGAP24Q8N264 748 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 TDRD5Q8NAT2 981 aaKnown RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 MAPK15Q8TD08 544 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 NXNL1Q96CM4 212 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 SCYL1Q96KG9 808 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 C1orf21Q9H246 121 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 COG4Q9H9E3 785 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 XPR1Q9UBH6 696 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 UXTQ9UBK9 157 aaPredicted RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 COL4A6Q14031 1691 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 MUSKO15146 869 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 DIAPH2O60879 1101 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 LMNAP02545 664 aaKnown RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 CHRNGP07510 517 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 MPSTP25325 297 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 OR1E1P30953 314 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 SLC6A4P31645 630 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 CPOXP36551 454 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 GRIA4P48058 902 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 LEPRP48357 1165 aaKnown RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 NUMBP49757 651 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 TSNAXIP1Q2TAA8 658 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 DNAL1Q4LDG9 190 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 KHDC1Q4VXA5 237 aaKnown RBP15.89■□□□□ 0.13
MBD1-227ENST00000592060 SLC9B1Q4ZJI4 515 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 ACSBG2Q5FVE4 666 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 ZNF789Q5FWF6 425 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 TMCO4Q5TGY1 634 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 SLC8B1Q6J4K2 584 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 LRRC43Q8N309 656 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 GPATCH11Q8N954 259 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 FBXO22Q8NEZ5 403 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 CFAP61Q8NHU2 1237 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 CALML6Q8TD86 181 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 WDR60Q8WVS4 1066 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 OMDQ99983 421 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 MTRRQ9UBK8 725 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 RAP2CQ9Y3L5 183 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 BRCA2P51587 3418 aa15.89■□□□□ 0.13
MBD1-227ENST00000592060 F5H5T6 163 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 DLX3O60479 287 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 GJB3O75712 270 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 ETFBP38117 255 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 CLCN5P51795 746 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 LGI2Q8N0V4 545 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 MOCOSQ96EN8 888 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 CEP295NLQ96MC4 621 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 OLFM1Q99784 485 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 VN1R3Q9BXE9 311 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 DCLRE1BQ9H816 532 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 IGSF5Q9NSI5 407 aa15.88■□□□□ 0.13
MBD1-227ENST00000592060 SLC7A4O43246 635 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 ACSL4O60488 711 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 TM7SF2O76062 418 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 CXCL10P02778 98 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 HOXD9P28356 352 aaPredicted RBP15.87■□□□□ 0.13
MBD1-227ENST00000592060 CCR10P46092 362 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 ARSDP51689 593 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 HK2P52789 917 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 SLC14A2Q15849 920 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 ALG1LQ6GMV1 187 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 RNF168Q8IYW5 571 aaPredicted RBP15.87■□□□□ 0.13
MBD1-227ENST00000592060 LSMEM2Q8N112 164 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 STON2Q8WXE9 905 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 SCLYQ96I15 445 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 FEM1CQ96JP0 617 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 CDK5RAP1Q96SZ6 601 aaKnown RBP15.87■□□□□ 0.13
MBD1-227ENST00000592060 SEMA3CQ99985 751 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 POLR1EQ9GZS1 481 aaKnown RBP15.87■□□□□ 0.13
MBD1-227ENST00000592060 ILKAPQ9H0C8 392 aaPredicted RBP15.87■□□□□ 0.13
MBD1-227ENST00000592060 MRPL46Q9H2W6 279 aaKnown RBP15.87■□□□□ 0.13
MBD1-227ENST00000592060 MFSD1Q9H3U5 465 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 ACSS2Q9NR19 701 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 DNMT3LQ9UJW3 386 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 MEI4A8MW99 385 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 MATN2O00339 956 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 LDB2O43679 373 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 PIGNO95427 931 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 PRMT2P55345 433 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 ACVR1Q04771 509 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 ARL13AQ5H913 290 aaPredicted RBP15.87■□□□□ 0.13
MBD1-227ENST00000592060 CFAP157Q5JU67 520 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 CILP2Q8IUL8 1156 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 CFAP52Q8N1V2 620 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 SPATA6LQ8N4H0 392 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 KCNV2Q8TDN2 545 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 HEXDCQ8WVB3 486 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 ZNF599Q96NL3 588 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 NDNQ99608 321 aa15.87■□□□□ 0.13
MBD1-227ENST00000592060 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms