RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 ITM2BQ9Y287 266 aa16.59■□□□□ 0.25
CIRBP-233ENST00000591622 PLXNA2O75051 1894 aa16.59■□□□□ 0.25
CIRBP-233ENST00000591622 TSPAN11A1L157 253 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 MUSKO15146 869 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 MAGEC1O60732 1142 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 PAK4O96013 591 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-233ENST00000591622 KDELR1P24390 212 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 CYLC1P35663 651 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-233ENST00000591622 SLC1A1P43005 524 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 CCT8P50990 548 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 RENBPP51606 427 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 SUOXP51687 545 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 HADHBP55084 474 aaKnown RBP16.58■□□□□ 0.24
CIRBP-233ENST00000591622 HNRNPDQ14103 355 aaKnown RBP16.58■□□□□ 0.24
CIRBP-233ENST00000591622 FGL2Q14314 439 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 SUZ12Q15022 739 aaKnown RBP16.58■□□□□ 0.24
CIRBP-233ENST00000591622 LRRC73Q5JTD7 316 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 PRAMEF14Q5SWL7 426 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 LRRC38Q5VT99 294 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 NCBP2-AS2Q69YL0 99 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 CAMK1DQ8IU85 385 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 TMTC1Q8IUR5 882 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 RAPGEF5Q92565 580 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 CAMK1GQ96NX5 476 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 ELF4Q99607 663 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-233ENST00000591622 MYOCQ99972 504 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 ATP13A3Q9H7F0 1226 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 ERVMER34-1Q9H9K5 563 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 FZD3Q9NPG1 666 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 LUC7LQ9NQ29 371 aaKnown RBP16.58■□□□□ 0.24
CIRBP-233ENST00000591622 CA5BQ9Y2D0 317 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 PCDHA13Q9Y5I0 950 aa16.58■□□□□ 0.24
CIRBP-233ENST00000591622 PI4KAP42356 2102 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 A0A1B0GTQ1 180 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 IGLON5A6NGN9 336 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 MFSD11O43934 449 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 PCDHGA12O60330 932 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 XPAP23025 273 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-233ENST00000591622 SERPINA4P29622 427 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 HSPA9P38646 679 aaKnown RBP16.57■□□□□ 0.24
CIRBP-233ENST00000591622 SCNN1BP51168 640 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 AP1S1P61966 158 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 BCL2L1Q07817 233 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 GALNT2Q10471 571 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 SGCGQ13326 291 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 ZNF235Q14590 738 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 UGP2Q16851 508 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 CFAP58Q5T655 872 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 BRAT1Q6PJG6 821 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 SPATS2Q86XZ4 545 aaKnown RBP16.57■□□□□ 0.24
CIRBP-233ENST00000591622 PQLC3Q8N755 202 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 SETD7Q8WTS6 366 aaKnown RBP16.57■□□□□ 0.24
CIRBP-233ENST00000591622 NSMCE1Q8WV22 266 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 ASB12Q8WXK4 309 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 ANP32EQ9BTT0 268 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 PCOLCE2Q9UKZ9 415 aa16.57■□□□□ 0.24
CIRBP-233ENST00000591622 EPN1Q9Y6I3 576 aaPredicted RBP16.57■□□□□ 0.24
CIRBP-233ENST00000591622 CACNA1EQ15878 2313 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 SPAARA0A1B0GVQ0 90 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 LRRD1A4D1F6 860 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 SOWAHDA6NJG2 315 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 ZNF487B1APH4 448 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 FLRT2O43155 660 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 CBFA2T3O75081 653 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 NDUFA10O95299 355 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 THEGLP0DJG4 465 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 ITIH2P19823 946 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 COMTP21964 271 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 GARSP41250 739 aaKnown RBP16.56■□□□□ 0.24
CIRBP-233ENST00000591622 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
CIRBP-233ENST00000591622 ARRB1P49407 418 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-233ENST00000591622 CLDN2P57739 230 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 FAM193AP78312 1265 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 SIM1P81133 766 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-233ENST00000591622 MARC1Q5VT66 337 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 GCNT7Q6ZNI0 430 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 ABI3BPQ7Z7G0 1075 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 VSIG1Q86XK7 387 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 RHOT1Q8IXI2 618 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 BBS5Q8N3I7 341 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 PGBD5Q8N414 524 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 FAM174AQ8TBP5 190 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 LENG8Q96PV6 779 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-233ENST00000591622 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 KLF6Q99612 283 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-233ENST00000591622 TFR2Q9UP52 801 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 HYOU1Q9Y4L1 999 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 PCDHB9Q9Y5E1 797 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 HS3ST3A1Q9Y663 406 aa16.56■□□□□ 0.24
CIRBP-233ENST00000591622 A0A0A6YYK5 440 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-233ENST00000591622 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-233ENST00000591622 C3orf70A6NLC5 250 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-233ENST00000591622 RAD51BO15315 384 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 YKT6O15498 198 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 SPOPO43791 374 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 CR2P20023 1033 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 CDC25BP30305 580 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 MMP13P45452 471 aa16.55■□□□□ 0.24
CIRBP-233ENST00000591622 IL9RQ01113 521 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms