RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 NSUN2Q08J23 767 aaKnown RBP eCLIP22.6■■□□□ 1.21
MBD3-208ENST00000590830 LBRQ14739 615 aaKnown RBP22.6■■□□□ 1.21
MBD3-208ENST00000590830 PAFAH1B3Q15102 231 aaKnown RBP22.6■■□□□ 1.21
MBD3-208ENST00000590830 KIAA1161Q6NSJ0 714 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 ZSWIM9Q86XI8 627 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 CCDC170Q8IYT3 715 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 PGBD5Q8N414 524 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 PSKH2Q96QS6 385 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 ZNF670Q9BS34 389 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 CINPQ9BW66 212 aaPredicted RBP22.6■■□□□ 1.21
MBD3-208ENST00000590830 C1QTNF2Q9BXJ5 285 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 SLC32A1Q9H598 525 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 PCDHGB2Q9Y5G2 931 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 PCDHA13Q9Y5I0 950 aa22.6■■□□□ 1.21
MBD3-208ENST00000590830 SPAARA0A1B0GVQ0 90 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 TSPAN11A1L157 253 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 C3orf70A6NLC5 250 aaPredicted RBP22.59■■□□□ 1.21
MBD3-208ENST00000590830 TSPAN6O43657 245 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 MFSD11O43934 449 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 CLDN2P57739 230 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 IL9RQ01113 521 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 TMCO4Q5TGY1 634 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 IQCHQ86VS3 1027 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 NAXDQ8IW45 347 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 HCAR2Q8TDS4 363 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 SKA1Q96BD8 255 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 BMFQ96LC9 184 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 ZNF641Q96N77 438 aaPredicted RBP22.59■■□□□ 1.21
MBD3-208ENST00000590830 ELF4Q99607 663 aaPredicted RBP22.59■■□□□ 1.21
MBD3-208ENST00000590830 SEPT3Q9UH03 358 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 BTBD3Q9Y2F9 522 aa22.59■■□□□ 1.21
MBD3-208ENST00000590830 PCNX2A6NKB5 2137 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 A0A1B0GTQ1 180 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 SOWAHDA6NJG2 315 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 MAP3K6O95382 1288 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 HNRNPA2B1P22626 353 aaKnown RBP22.58■■□□□ 1.21
MBD3-208ENST00000590830 SERPINB6P35237 376 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 SLC10A2Q12908 348 aaPredicted RBP22.58■■□□□ 1.21
MBD3-208ENST00000590830 SLC45A4Q5BKX6 768 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 GCNT7Q6ZNI0 430 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 MAP7D3Q8IWC1 876 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 TUBGCP5Q96RT8 1024 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 KLF6Q99612 283 aaPredicted RBP22.58■■□□□ 1.21
MBD3-208ENST00000590830 GDF3Q9NR23 364 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 PCOLCE2Q9UKZ9 415 aa22.58■■□□□ 1.21
MBD3-208ENST00000590830 EPN1Q9Y6I3 576 aaPredicted RBP22.58■■□□□ 1.21
MBD3-208ENST00000590830 RCCD1A6NED2 376 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 NEMP1O14524 444 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 CR2P20023 1033 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 COMTP21964 271 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 AKT2P31751 481 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 SCNN1BP51168 640 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 GBE1Q04446 702 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 GALNT2Q10471 571 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 GRM3Q14832 879 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 UGP2Q16851 508 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 ATPAF2Q8N5M1 289 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 OR13H1Q8NG92 308 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 SETD7Q8WTS6 366 aaKnown RBP22.57■■□□□ 1.2
MBD3-208ENST00000590830 LRRN4Q8WUT4 740 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 KLHDC7BQ96G42 594 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 RNF157Q96PX1 679 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 CAAP1Q9H8G2 361 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 SALL4Q9UJQ4 1053 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 CABIN1Q9Y6J0 2220 aa22.57■■□□□ 1.2
MBD3-208ENST00000590830 POM121BA6NF01 834 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 TRAFD1O14545 582 aaPredicted RBP22.56■■□□□ 1.2
MBD3-208ENST00000590830 PCDHGA12O60330 932 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 DFNA5O60443 496 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 MMP20O60882 483 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 PRKCGP05129 697 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 PMLP29590 882 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 HADHBP55084 474 aaKnown RBP22.56■■□□□ 1.2
MBD3-208ENST00000590830 OVGP1Q12889 678 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 TMEM52BQ4KMG9 183 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 LRRC38Q5VT99 294 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 RAD9BQ6WBX8 426 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 KDM7AQ6ZMT4 941 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 ABI3BPQ7Z7G0 1075 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 TMTC1Q8IUR5 882 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 TEX26Q8N6G2 289 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 ASB12Q8WXK4 309 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 ECHDC3Q96DC8 303 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 LENG8Q96PV6 779 aaPredicted RBP22.56■■□□□ 1.2
MBD3-208ENST00000590830 GOLPH3Q9H4A6 298 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 ATP13A3Q9H7F0 1226 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 ERVMER34-1Q9H9K5 563 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 PCDH12Q9NPG4 1184 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 REXO2Q9Y3B8 237 aaKnown RBP22.56■■□□□ 1.2
MBD3-208ENST00000590830 HS3ST3A1Q9Y663 406 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 TMEM131Q92545 1883 aa22.56■■□□□ 1.2
MBD3-208ENST00000590830 NDUFA10O95299 355 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 THEGLP0DJG4 465 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 CYLC1P35663 651 aaPredicted RBP22.55■■□□□ 1.2
MBD3-208ENST00000590830 GARSP41250 739 aaKnown RBP22.55■■□□□ 1.2
MBD3-208ENST00000590830 SLC1A1P43005 524 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 NOP2P46087 812 aaKnown RBP22.55■■□□□ 1.2
MBD3-208ENST00000590830 RXRGP48443 463 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 CCT8P50990 548 aa22.55■■□□□ 1.2
MBD3-208ENST00000590830 RENBPP51606 427 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms