RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 PPFIA2O75334 1257 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 DAB1O75553 588 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 CD160O95971 181 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 RPLP0P05388 317 aaKnown RBP17.58■□□□□ 0.4
RETREG3-210ENST00000590541 JMJD7P0C870 316 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 TFE3P19532 575 aaPredicted RBP17.58■□□□□ 0.4
RETREG3-210ENST00000590541 ITIH1P19827 911 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 GKP32189 559 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 NOS2P35228 1153 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 YPEL5P62699 121 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 CYP4F2P78329 520 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 ARF5P84085 180 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 CLCA4Q14CN2 919 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 MANEAQ5SRI9 462 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 RETSATQ6NUM9 610 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 MACC1Q6ZN28 852 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 ZDHHC17Q8IUH5 632 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 RAB7BQ96AH8 199 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 CPEB1Q9BZB8 566 aaKnown RBP17.58■□□□□ 0.4
RETREG3-210ENST00000590541 SLC25A18Q9H1K4 315 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 WDCPQ9H6R7 721 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 TMPRSS4Q9NRS4 437 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 GEMIN8Q9NWZ8 242 aaKnown RBP17.58■□□□□ 0.4
RETREG3-210ENST00000590541 SIRPGQ9P1W8 387 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 ZNF212Q9UDV6 495 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 DAAM1Q9Y4D1 1078 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 LOXL2Q9Y4K0 774 aa17.58■□□□□ 0.4
RETREG3-210ENST00000590541 IGLV3-10A0A075B6K4 115 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 PRAMEF33A0A0G2JMD5 474 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 ILVBLA1L0T0 632 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 PRAMEF10O60809 474 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 OR1E1P30953 314 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 CLCN1P35523 988 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 EIF4A3P38919 411 aaKnown RBP17.57■□□□□ 0.4
RETREG3-210ENST00000590541 ETV5P41161 510 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 CXCR3P49682 368 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 APBA1Q02410 837 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 PPARDQ03181 441 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 SLC20A2Q08357 652 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 UBAP2LQ14157 1087 aaKnown RBP17.57■□□□□ 0.4
RETREG3-210ENST00000590541 BRMS1LQ5PSV4 323 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 KLHDC7AQ5VTJ3 777 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 C11orf57Q6ZUT1 292 aaPredicted RBP17.57■□□□□ 0.4
RETREG3-210ENST00000590541 SLC26A9Q7LBE3 791 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 VPS36Q86VN1 386 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 ZFAND4Q86XD8 727 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 DTX1Q86Y01 620 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 PCDH19Q8TAB3 1148 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 TMEM74Q96NL1 305 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 NPY6RQ99463 290 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 FUCA2Q9BTY2 467 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 SPON2Q9BUD6 331 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 LRRN3Q9H3W5 708 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 MBNL1Q9NR56 388 aaKnown RBP17.57■□□□□ 0.4
RETREG3-210ENST00000590541 SAMSN1Q9NSI8 373 aaKnown RBP17.57■□□□□ 0.4
RETREG3-210ENST00000590541 FOXJ2Q9P0K8 574 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 SEPT10Q9P0V9 454 aa17.57■□□□□ 0.4
RETREG3-210ENST00000590541 HECAQ9UBI9 543 aaPredicted RBP17.57■□□□□ 0.4
RETREG3-210ENST00000590541 RELNP78509 3460 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 NEMP1O14524 444 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 MBD3O95983 291 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 ERBB2P04626 1255 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 ELOCQ15369 112 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 ZNF805Q5CZA5 627 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 DPY19L2P1Q6NXN4 242 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 LVRNQ6Q4G3 990 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 SASS6Q6UVJ0 657 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 ZNF783Q6ZMS7 281 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 PASD1Q8IV76 773 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 FSTL5Q8N475 847 aaPredicted RBP17.56■□□□□ 0.4
RETREG3-210ENST00000590541 TMEM35BQ8NCS4 154 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 C1orf131Q8NDD1 294 aaKnown RBP17.56■□□□□ 0.4
RETREG3-210ENST00000590541 OR6K2Q8NGY2 324 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 C1orf74Q96LT6 269 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 TM6SF2Q9BZW4 377 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 ATP13A1Q9HD20 1204 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 PLCB1Q9NQ66 1216 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 ANO10Q9NW15 660 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 RRN3Q9NYV6 651 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 DOLKQ9UPQ8 538 aa17.56■□□□□ 0.4
RETREG3-210ENST00000590541 AGRPO00253 132 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 AREL1O15033 823 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 GP1BBP13224 206 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 UCHL3P15374 230 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 HK3P52790 923 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 SLC6A3Q01959 620 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 ZFP36L1Q07352 338 aaKnown RBP17.55■□□□□ 0.4
RETREG3-210ENST00000590541 RAPGEF1Q13905 1077 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 TCEA2Q15560 299 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 HSP90AA4PQ58FG1 418 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 CDKAL1Q5VV42 579 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 LRRC31Q6UY01 552 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 SLC47A2Q86VL8 602 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 PLPP6Q8IY26 295 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 ZSCAN1Q8NBB4 408 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 TP53I13Q8NBR0 393 aaPredicted RBP17.55■□□□□ 0.4
RETREG3-210ENST00000590541 ANKRD20A12PQ8NF67 263 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 ZNF397Q8NF99 534 aaPredicted RBP17.55■□□□□ 0.4
RETREG3-210ENST00000590541 GPT2Q8TD30 523 aa17.55■□□□□ 0.4
RETREG3-210ENST00000590541 SCG3Q8WXD2 468 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms