RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 PGBD5Q8N414 524 aa21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 PCDH20Q8N6Y1 951 aaKnown RBP21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 TSEN2Q8NCE0 465 aaKnown RBP21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 CCNYQ8ND76 341 aa21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 ISG20Q96AZ6 181 aaKnown RBP21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 HDAC11Q96DB2 347 aa21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 TSGA13Q96PP4 275 aa21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 WDR24Q96S15 920 aa21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 C10orf88Q9H8K7 445 aa21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 APOBEC2Q9Y235 224 aaKnown RBP21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 JRKLQ9Y4A0 524 aa21.77■■□□□ 1.08
R3HDM4-206ENST00000590454 PI4KAP42356 2102 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 GOLGA6L9A6NEM1 432 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 MCF2LO15068 1137 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 INSIG1O15503 277 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 GNSP15586 552 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 MX2P20592 715 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 NR2C2P49116 596 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 CCNHP51946 323 aaPredicted RBP21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 RHOAP61586 193 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 KLF1Q13351 362 aaPredicted RBP21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 ELAVL3Q14576 367 aaKnown RBP21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 LBRQ14739 615 aaKnown RBP21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 POM121L1PQ3SYA9 428 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 SYCP2LQ5T4T6 812 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 TMCO4Q5TGY1 634 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 ZC3H18Q86VM9 953 aaKnown RBP21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 LRRC49Q8IUZ0 686 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 NAXDQ8IW45 347 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 PNPLA1Q8N8W4 532 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 ACTL9Q8TC94 416 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 CASKIN2Q8WXE0 1202 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 P3H4Q92791 437 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 NSMCE3Q96MG7 304 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 ZNF599Q96NL3 588 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 CYP8B1Q9UNU6 501 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 R3HDM2Q9Y2K5 976 aaKnown RBP21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 PCDH15Q96QU1 1955 aa21.76■■□□□ 1.07
R3HDM4-206ENST00000590454 APOC4-APOC2K7ER74 178 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 KCNK1O00180 336 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 MATN3O15232 486 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 FANCGO15287 622 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 NDUFS2O75306 463 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 APOC2P02655 101 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 CCNCP24863 283 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 CHRNA3P32297 505 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 CETN2P41208 172 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 PSMD8P48556 350 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 GNG11P61952 73 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 OTUD4Q01804 1114 aaKnown RBP21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 PPIDQ08752 370 aaKnown RBP21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 PDK1Q15118 436 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 ADAT2Q7Z6V5 191 aaKnown RBP21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 CCDC13Q8IYE1 715 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 RYBPQ8N488 228 aaPredicted RBP21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 OR2AP1Q8NGE2 309 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 GRIN3AQ8TCU5 1115 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 OR8D1Q8WZ84 308 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 MAML1Q92585 1016 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 FOXJ1Q92949 421 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 SIPA1Q96FS4 1042 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 CINPQ9BW66 212 aaPredicted RBP21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 CARD9Q9H257 536 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 HECAQ9UBI9 543 aaPredicted RBP21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 PPM1HQ9ULR3 514 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 WASF2Q9Y6W5 498 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 GON4LQ3T8J9 2241 aa21.75■■□□□ 1.07
R3HDM4-206ENST00000590454 ADAMTS9Q9P2N4 1935 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 PLK4O00444 970 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 MID1O15344 667 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 TJP3O95049 919 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 GSRP00390 522 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 C7P10643 843 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 AP1B1Q10567 949 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 ZBTB17Q13105 803 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 RFTN1Q14699 578 aaPredicted RBP21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 PRKD1Q15139 912 aaPredicted RBP21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 NOMO1Q15155 1222 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 CST6Q15828 149 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 ARSIQ5FYB1 569 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 WDR45BQ5MNZ6 344 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 SEL1L2Q5TEA6 688 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 CCDC181Q5TID7 509 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 ZNF776Q68DI1 518 aaPredicted RBP21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 TEX26Q8N6G2 289 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 UBE2Q2Q8WVN8 375 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 PRCCQ92733 491 aaPredicted RBP21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 CEP41Q9BYV8 373 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 ZDHHC5Q9C0B5 715 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 ZDHHC6Q9H6R6 413 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 SERGEFQ9UGK8 458 aa21.74■■□□□ 1.07
R3HDM4-206ENST00000590454 ANKRD11Q6UB99 2663 aaPredicted RBP21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 DSPP15924 2871 aaKnown RBP21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 LEFTY1O75610 366 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 IL1BP01584 269 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 MMP13P45452 471 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 RECQLP46063 649 aaPredicted RBP21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 MAXP61244 160 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 SNRPD1P62314 119 aaKnown RBP21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 MYLK3Q32MK0 819 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms