RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 TMEM62Q0P6H9 643 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 EIF4EBP2Q13542 120 aaPredicted RBP12.5□□□□□ -0.41
PDE4A-207ENST00000590407 FAM83EQ2M2I3 478 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 SAMD4BQ5PRF9 694 aaKnown RBP12.5□□□□□ -0.41
PDE4A-207ENST00000590407 DLK2Q6UY11 383 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 SLC22A9Q8IVM8 553 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 ARHGAP12Q8IWW6 846 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 GOLM1Q8NBJ4 401 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 ZFP28Q8NHY6 868 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 CNBD2Q96M20 576 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 RANBP9Q96S59 729 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 NPAS2Q99743 824 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 EFHD1Q9BUP0 239 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 ABHD16BQ9H3Z7 469 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 SLC38A7Q9NVC3 462 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 FNIP2Q9P278 1114 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 FBXO5Q9UKT4 447 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 CDH9Q9ULB4 789 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 GINS2Q9Y248 185 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 GOLGA8TH3BQL2 631 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 MATN3O15232 486 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 FGF10O15520 208 aaPredicted RBP12.49□□□□□ -0.41
PDE4A-207ENST00000590407 IPO13O94829 963 aaKnown RBP12.49□□□□□ -0.41
PDE4A-207ENST00000590407 F7P08709 466 aaPredicted RBP12.49□□□□□ -0.41
PDE4A-207ENST00000590407 RBP1P09455 135 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 SLC1A2P43004 574 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 MPP1Q00013 466 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 IKBKEQ14164 716 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 SPATS1Q496A3 300 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 C6orf52Q5T4I8 152 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 AGAP9Q5VTM2 703 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 REP15Q6BDI9 236 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 ESRP1Q6NXG1 681 aaKnown RBP12.49□□□□□ -0.41
PDE4A-207ENST00000590407 CNSTQ6PJW8 725 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 GPRIN1Q7Z2K8 1008 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 CCNYL1Q8N7R7 359 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 ANKFN1Q8N957 763 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 ARRDC4Q8NCT1 418 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 HMGCLL1Q8TB92 370 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 CALML6Q8TD86 181 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 FATE1Q969F0 183 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 TMA16Q96EY4 203 aaKnown RBP12.49□□□□□ -0.41
PDE4A-207ENST00000590407 TSPAN17Q96FV3 270 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 SMARCD1Q96GM5 515 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 SENP8Q96LD8 212 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 PRPF18Q99633 342 aaKnown RBP12.49□□□□□ -0.41
PDE4A-207ENST00000590407 SLC25A23Q9BV35 468 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 ARNT2Q9HBZ2 717 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 SPAG4Q9NPE6 437 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 ARHGEF38Q9NXL2 777 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 TMEM181Q9P2C4 612 aa12.49□□□□□ -0.41
PDE4A-207ENST00000590407 G3BP2Q9UN86 482 aaKnown RBP12.49□□□□□ -0.41
PDE4A-207ENST00000590407 KCNU1A8MYU2 1149 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 STX16-NPEPL1H3BU86 382 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 PSMD12O00232 456 aaPredicted RBP12.48□□□□□ -0.41
PDE4A-207ENST00000590407 UBDO15205 165 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 PAPSS2O95340 614 aaPredicted RBP12.48□□□□□ -0.41
PDE4A-207ENST00000590407 SNRPB2P08579 225 aaKnown RBP12.48□□□□□ -0.41
PDE4A-207ENST00000590407 USP17L7P0C7H9 530 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 SPATA31D3P0C874 917 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 CPB1P15086 417 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 AVPR1AP37288 418 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 CRYBB1P53674 252 aaPredicted RBP12.48□□□□□ -0.41
PDE4A-207ENST00000590407 SLC12A2P55011 1212 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 BRMS1LQ5PSV4 323 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 MANEALQ5VSG8 457 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 IL23RQ5VWK5 629 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 AFMIDQ63HM1 303 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 TIGD7Q6NT04 549 aaPredicted RBP12.48□□□□□ -0.41
PDE4A-207ENST00000590407 KLC3Q6P597 504 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 RANBP10Q6VN20 620 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 GK5Q6ZS86 529 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 SPATA31D4Q6ZUB0 917 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 DEFB132Q7Z7B7 95 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 DENND6AQ8IWF6 608 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 ATPAF2Q8N5M1 289 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 PACRGLQ8N7B6 248 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 HM13Q8TCT9 377 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 GFM2Q969S9 779 aaKnown RBP12.48□□□□□ -0.41
PDE4A-207ENST00000590407 EME1Q96AY2 570 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 ROPN1LQ96C74 230 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 MOCOSQ96EN8 888 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 ELMO2Q96JJ3 720 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 PPP1R36Q96LQ0 422 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 FICDQ9BVA6 458 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 RHOBTB2Q9BYZ6 727 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 TBC1D13Q9NVG8 400 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 ARMC1Q9NVT9 282 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 PCDHGB4Q9UN71 923 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 RNF11Q9Y3C5 154 aa12.48□□□□□ -0.41
PDE4A-207ENST00000590407 PCDHGB5Q9Y5G0 923 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms