RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 BCLAF3A2AJT9 711 aaKnown RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 CES2O00748 559 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 NFKB1P19838 968 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 XPAP23025 273 aaPredicted RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 CD86P42081 329 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 RPL6Q02878 288 aaKnown RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 SIX1Q15475 284 aaPredicted RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 PAPD7Q5XG87 772 aaKnown RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 FBXL19Q6PCT2 694 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 NCEH1Q6PIU2 408 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 NYAP1Q6ZVC0 841 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 ERN2Q76MJ5 926 aaKnown RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 ZNF567Q8N184 647 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 FAM71DQ8N9W8 422 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 AP1M1Q9BXS5 423 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 CPEB1Q9BZB8 566 aaKnown RBP22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 BTBD1Q9H0C5 482 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 ZNF148Q9UQR1 794 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 PCDHGC4Q9Y5F7 938 aa22.68■■□□□ 1.22
R3HDM4-205ENST00000589445 GOLGA6L10A0A0M3HER8 536 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 CFAP69A5D8W1 941 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 ZNF189O75820 626 aaPredicted RBP22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 SERPINF2P08697 491 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 OXTRP30559 389 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 ADPRHP54922 357 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 NIPAL4Q0D2K0 466 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 TRAF2Q12933 501 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 TEX44Q53QW1 395 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 RALGPS1Q5JS13 557 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 AGBL4Q5VU57 503 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 ALG1LQ6GMV1 187 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 PID1Q7Z2X4 250 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 OR14C36Q8NHC7 312 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 VAT1Q99536 393 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 GPR174Q9BXC1 333 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 NEUROG2Q9H2A3 272 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 SUV39H2Q9H5I1 410 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 GLOD4Q9HC38 313 aa22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 MBD1Q9UIS9 605 aaPredicted RBP22.67■■□□□ 1.22
R3HDM4-205ENST00000589445 TNRC6BQ9UPQ9 1833 aaKnown RBP22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 C16orf96A6NNT2 1141 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 HRO43593 1189 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 SOCS5O75159 536 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 SEMA4FO95754 770 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 CPP00450 1065 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 IGLV3-19P01714 112 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 ADRB3P13945 408 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 CA4P22748 312 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 ACSL1P33121 698 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 CNR2P34972 360 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 SIM2Q14190 667 aaPredicted RBP22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 LPAL2Q16609 132 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 PIP5KL1Q5T9C9 394 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 ITPRIPL1Q6GPH6 555 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 SLC36A4Q6YBV0 504 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 ARMCX6Q7L4S7 300 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 DEFB119Q8N690 84 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 CCDC110Q8TBZ0 833 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 ACTRT1Q8TDG2 376 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 ZNF592Q92610 1267 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 TEKT5Q96M29 485 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 NSMCE3Q96MG7 304 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 ZNF641Q96N77 438 aaPredicted RBP22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 RBM15Q96T37 977 aaKnown RBP eCLIP22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 HDAC8Q9BY41 377 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 TRHDEQ9UKU6 1024 aa22.66■■□□□ 1.22
R3HDM4-205ENST00000589445 PROB1E7EW31 1015 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 LILRB5O75023 590 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 IFNB1P01574 187 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 ABL2P42684 1182 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 GDF10P55107 478 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 CCDC15Q0P6D6 951 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 OASLQ15646 514 aaKnown RBP22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 ELF2Q15723 593 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 PCSK7Q16549 785 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 ARHGEF18Q6ZSZ5 1173 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 C11orf74Q86VG3 221 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 ARRDC2Q8TBH0 407 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 SNX19Q92543 992 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 NKD2Q969F2 451 aaPredicted RBP22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 VOPP1Q96AW1 172 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 SPATA13Q96N96 652 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 GBA3Q9H227 469 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 SGK2Q9HBY8 427 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 TTC7AQ9ULT0 858 aaPredicted RBP22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 ITM2BQ9Y287 266 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 RAI2Q9Y5P3 530 aa22.65■■□□□ 1.22
R3HDM4-205ENST00000589445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 MEI4A8MW99 385 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 NEMP1O14524 444 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 SLC7A4O43246 635 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 PRKCGP05129 697 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 C7P10643 843 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 CCNG2Q16589 344 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 ANKRD20A2Q5SQ80 823 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 ARMC12Q5T9G4 340 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 ANKRD20A1Q5TYW2 823 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 ANKRD20A3Q5VUR7 823 aa22.64■■□□□ 1.21
R3HDM4-205ENST00000589445 BRAT1Q6PJG6 821 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms