RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 KLHL40Q2TBA0 621 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 ZNF805Q5CZA5 627 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 TRNP1Q6NT89 227 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 RETSATQ6NUM9 610 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 ENPP7Q6UWV6 458 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 LRRC31Q6UY01 552 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 ZNF574Q6ZN55 896 aaPredicted RBP15.3■□□□□ 0.04
SF3A2-204ENST00000589118 SLC26A9Q7LBE3 791 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 TTC7BQ86TV6 843 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 TP53I13Q8NBR0 393 aaPredicted RBP15.3■□□□□ 0.04
SF3A2-204ENST00000589118 SPATA20Q8TB22 786 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 NELFBQ8WX92 580 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 DHTKD1Q96HY7 919 aaPredicted RBP15.3■□□□□ 0.04
SF3A2-204ENST00000589118 EPAS1Q99814 870 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 LRRN3Q9H3W5 708 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.3■□□□□ 0.04
SF3A2-204ENST00000589118 GPR34Q9UPC5 381 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 CTNND2Q9UQB3 1225 aa15.3■□□□□ 0.04
SF3A2-204ENST00000589118 UTP20O75691 2785 aaKnown RBP15.3■□□□□ 0.04
SF3A2-204ENST00000589118 SDK2Q58EX2 2172 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 IGLV3-10A0A075B6K4 115 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 ILVBLA1L0T0 632 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 C9orf172C9J069 976 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 PSMA7O14818 248 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 ITGB2P05107 769 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 PTK2BQ14289 1009 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 IRF4Q15306 451 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 MACC1Q6ZN28 852 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 ARL10Q8N8L6 244 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 WDR48Q8TAF3 677 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 ASB12Q8WXK4 309 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 FUCA2Q9BTY2 467 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 SRRTQ9BXP5 876 aaKnown RBP15.29■□□□□ 0.04
SF3A2-204ENST00000589118 CEP44Q9C0F1 390 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 STRADBQ9C0K7 418 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 SYNCQ9H7C4 482 aa15.29■□□□□ 0.04
SF3A2-204ENST00000589118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
SF3A2-204ENST00000589118 RELNP78509 3460 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 BIN1O00499 593 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 AREL1O15033 823 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 NVLO15381 856 aaKnown RBP15.28■□□□□ 0.04
SF3A2-204ENST00000589118 TM7SF2O76062 418 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 SMC2O95347 1197 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 CTSEP14091 401 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 FLT3P36888 993 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 HK3P52790 923 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 BRMS1LQ5PSV4 323 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 HIST2H2BCQ6DN03 193 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 SLC47A2Q86VL8 602 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 CREBRFQ8IUR6 639 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 DENND6BQ8NEG7 585 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 PMEPA1Q969W9 287 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 EDEM3Q9BZQ6 932 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 SEMA6CQ9H3T2 930 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 DNAI1Q9UI46 699 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 OR1A2Q9Y585 309 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 RNF215Q9Y6U7 377 aa15.28■□□□□ 0.04
SF3A2-204ENST00000589118 INSIG1O15503 277 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 CCL4P13236 92 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 TIMP2P16035 220 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 CCKBRP32239 447 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 CLCN1P35523 988 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 YPEL5P62699 121 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 SLC20A2Q08357 652 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 UBAP2LQ14157 1087 aaKnown RBP15.27■□□□□ 0.04
SF3A2-204ENST00000589118 WSCD2Q2TBF2 565 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 MYLK3Q32MK0 819 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 TRIM65Q6PJ69 517 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 PHLDB2Q86SQ0 1253 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 CCNJLQ8IV13 435 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 ZNF397Q8NF99 534 aaPredicted RBP15.27■□□□□ 0.04
SF3A2-204ENST00000589118 NT5C3BQ969T7 300 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 C1orf74Q96LT6 269 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 CFAP57Q96MR6 1250 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 SEMA3CQ99985 751 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 ZYG11BQ9C0D3 744 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 SLC25A18Q9H1K4 315 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 EPN3Q9H201 632 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 ACSL6Q9UKU0 697 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 DAAM1Q9Y4D1 1078 aa15.27■□□□□ 0.04
SF3A2-204ENST00000589118 FAM72CH0Y354 149 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 GOLGA8SH3BPF8 625 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 PPFIA2O75334 1257 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 PRKCGP05129 697 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 ZFP36L1Q07352 338 aaKnown RBP15.26■□□□□ 0.03
SF3A2-204ENST00000589118 EIF3IQ13347 325 aaKnown RBP15.26■□□□□ 0.03
SF3A2-204ENST00000589118 STIM1Q13586 685 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 INPP5AQ14642 412 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 C16orf72Q14CZ0 275 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 PHF19Q5T6S3 580 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 FAM72AQ5TYM5 149 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 FAM72DQ6L9T8 149 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 GDPD4Q6W3E5 623 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 FAM72BQ86X60 149 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 DTX1Q86Y01 620 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 OR2AP1Q8NGE2 309 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 CCL4L1Q8NHW4 92 aa15.26■□□□□ 0.03
SF3A2-204ENST00000589118 CXorf40AQ8TE69 158 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms