RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 IGLV3-25P01717 112 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SAT1P21673 171 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 NMBRP28336 390 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SERPINB5P36952 375 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RPIAP49247 311 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TUBP50607 506 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CACNA2D1P54289 1103 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RAB10P61026 200 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 NRG1Q02297 640 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 MTA1Q13330 715 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 NFE2Q16621 373 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RABGAP1LQ5R372 815 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 C1orf53Q5VUE5 145 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 IRGCQ6NXR0 463 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 KLC3Q6P597 504 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 BHLHA9Q7RTU4 235 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 MON1AQ86VX9 555 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 ZC3HC1Q86WB0 502 aaKnown RBP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 CNTN4Q8IWV2 1026 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 KLHDC8BQ8IXV7 354 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 IPMKQ8NFU5 416 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 OR6Y1Q8NGX8 325 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 ACTRT2Q8TDY3 377 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TSPAN17Q96FV3 270 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 IL12RB2Q99665 862 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RTKNQ9BST9 563 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 OSBPL1AQ9BXW6 950 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 TRPV6Q9H1D0 765 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 ANLNQ9NQW6 1124 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 RBM22Q9NW64 420 aaKnown RBP eCLIP7.49□□□□□ -1.21
ZNF540-206ENST00000589117 NCKIPSDQ9NZQ3 722 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SLC7A8Q9UHI5 535 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 SQORQ9Y6N5 450 aa7.49□□□□□ -1.21
ZNF540-206ENST00000589117 MYO18AQ92614 2054 aaKnown RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 HEATR9A2RTY3 570 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 TRPC5OSA6NMA1 111 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 G3V2L1 256 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 I6L893 689 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 DCXO43602 365 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 CCNT2O60583 730 aaKnown RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 BAG2O95816 211 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 ANPEPP15144 967 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 HOXC13P31276 330 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 POU4F1Q01851 419 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 TUBB3Q13509 450 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 LBRQ14739 615 aaKnown RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 GRM3Q14832 879 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 POU6F1Q14863 301 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 GSTA3Q16772 222 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 FAM83EQ2M2I3 478 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 GLB1LQ6UWU2 654 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 C16orf89Q6UX73 402 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 ADGRG6Q86SQ4 1221 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 MYLK4Q86YV6 388 aaPredicted RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 FAR2Q96K12 515 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 ZNF778Q96MU6 729 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 ADAM2Q99965 735 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 GORASP1Q9BQQ3 440 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 CAB39LQ9H9S4 337 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 EML4Q9HC35 981 aaKnown RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 VPS45Q9NRW7 570 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 CPSF2Q9P2I0 782 aaKnown RBP7.48□□□□□ -1.21
ZNF540-206ENST00000589117 CACNG4Q9UBN1 327 aa7.48□□□□□ -1.21
ZNF540-206ENST00000589117 RGSL1A5PLK6 1076 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 MATN2O00339 956 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 SEPT4O43236 478 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 MAFKO60675 156 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 EOMESO95936 686 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 PGK1P00558 417 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 AHSGP02765 367 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 COX4I1P13073 169 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 TFEBP19484 476 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 CD52P31358 61 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 CPOXP36551 454 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 BRCC3P46736 316 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 GRIA4P48058 902 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 CD151P48509 253 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 NDST2P52849 883 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 RABGGTBP53611 331 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 SLC5A3P53794 718 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 MLLT6P55198 1093 aaPredicted RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 FCGRTP55899 365 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 DSG1Q02413 1049 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 SREBF2Q12772 1141 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 OLIG2Q13516 323 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 HNRNPDQ14103 355 aaKnown RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 SMAD1Q15797 465 aaKnown RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 AGAP9Q5VTM2 703 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 OTOP3Q7RTS5 596 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 PIWIL4Q7Z3Z4 852 aaKnown RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 SDCCAG8Q86SQ7 713 aaPredicted RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 PLD6Q8N2A8 252 aaKnown RBP7.47□□□□□ -1.21
ZNF540-206ENST00000589117 FBXW8Q8N3Y1 598 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 CNTD1Q8N815 330 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 ZNF781Q8N8C0 355 aa7.47□□□□□ -1.21
ZNF540-206ENST00000589117 RTL3Q8N8U3 475 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms