RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ATXN7L3BQ96GX2 97 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 PITPNM3Q9BZ71 974 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 PRKD2Q9BZL6 878 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ALG13Q9NP73 1137 aaKnown RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ASAH2Q9NR71 780 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 NSMCE4AQ9NXX6 385 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 PRKAG3Q9UGI9 489 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SLC2A6Q9UGQ3 507 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 STOML2Q9UJZ1 356 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 LSM7Q9UK45 103 aaKnown RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 PHTF1Q9UMS5 762 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 LZTS1Q9Y250 596 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 PLLPQ9Y342 182 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 SH3BP1Q9Y3L3 701 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 USP15Q9Y4E8 981 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ACTL7AQ9Y615 435 aa8.86□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF106Q9H2Y7 1883 aaKnown RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 MYO7AQ13402 2215 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 HEATR9A2RTY3 570 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 C2orf71A6NGG8 1288 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 HIDE1A8MVS5 230 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 H0Y626 953 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CBX4O00257 560 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 TIMM44O43615 452 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 EDF1O60869 148 aaKnown RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 GLRA3O75311 464 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 GJB3O75712 270 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 VAPBO95292 243 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 OLFM2O95897 454 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ALDOAP04075 364 aaKnown RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CKMP06732 381 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 GJA1P17302 382 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 BGNP21810 368 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CRHR1P34998 444 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 BMPR1AP36894 532 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ETV4P43268 484 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 LIMK2P53671 638 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 THOC5Q13769 683 aaKnown RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 PDE1CQ14123 709 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 IHHQ14623 411 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 RFTN1Q14699 578 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 LAPTM4AQ15012 233 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ARMC3Q5W041 872 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 KIAA0930Q6ICG6 404 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CXorf57Q6NSI4 855 aaKnown RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CGB2Q6NT52 195 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ESRP1Q6NXG1 681 aaKnown RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 C6orf89Q6UWU4 347 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF783Q6ZMS7 281 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CCDC121Q6ZUS5 278 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 GAREM2Q75VX8 874 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 SRLQ86TD4 932 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 TRIM42Q8IWZ5 723 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 DCLK2Q8N568 766 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 OTUD6BQ8N6M0 293 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 MAB21L3Q8N8X9 362 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ARMC2Q8NEN0 867 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 SLC22A17Q8WUG5 538 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 FEM1CQ96JP0 617 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ZNF778Q96MU6 729 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 RANBP9Q96S59 729 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 MGME1Q9BQP7 344 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CORO1BQ9BR76 489 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 FAM167BQ9BTA0 163 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 LRRC3Q9BY71 257 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ACE2Q9BYF1 805 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 VPS11Q9H270 941 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 MANSC1Q9H8J5 431 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 ARNT2Q9HBZ2 717 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 SLCO1B3Q9NPD5 702 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CFAP97Q9P2B7 532 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 TBC1D30Q9Y2I9 924 aa8.85□□□□□ -0.99
SMAD4-206ENST00000588860 MTO1Q9Y2Z2 717 aaKnown RBP8.85□□□□□ -0.99
SMAD4-206ENST00000588860 CCDC195A0A1B0GUA6 201 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 LOC285095A0A1B0GVY8 99 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 A0A1W2PRU2 124 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 E2F8A0AVK6 867 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 ANKRD65E5RJM6 399 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 GREM1O60565 184 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 LUC7L3O95232 432 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 TOP3BO95985 862 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 C1RP00736 705 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 MPOP05164 745 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 FGF1P05230 155 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 SERPINF2P08697 491 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 ATXN1LP0C7T5 689 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 HLA-DPA1P20036 260 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 DNAJB1P25685 340 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 TYK2P29597 1187 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 RGRP47804 291 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 ARCN1P48444 511 aaKnown RBP8.84□□□□□ -0.99
SMAD4-206ENST00000588860 SLC7A9P82251 487 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 MPP1Q00013 466 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 CDH18Q13634 790 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 GALNT3Q14435 633 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 CYTH1Q15438 398 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 UGP2Q16851 508 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 STXBP5Q5T5C0 1151 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 TSTD2Q5T7W7 516 aa8.84□□□□□ -0.99
SMAD4-206ENST00000588860 N4BP2L1Q5TBK1 243 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms