RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 TIMP2P16035 220 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 HNRNPH3P31942 346 aaKnown RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 RGRP47804 291 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 ZNF135P52742 658 aaPredicted RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 SLC25A11Q02978 314 aaKnown RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 ALKBH5Q6P6C2 394 aaKnown RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 KYAT3Q6YP21 454 aaKnown RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 CCNI2Q6ZMN8 369 aaPredicted RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 KDM7AQ6ZMT4 941 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 Q6ZSR6 202 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 PTAR1Q7Z6K3 402 aaPredicted RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 NIPA2Q8N8Q9 360 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 CNDP2Q96KP4 475 aaKnown RBP18.25■□□□□ 0.51
HDAC5-209ENST00000588703 NUP85Q9BW27 656 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 ZWILCHQ9H900 591 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 ETNK2Q9NVF9 386 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 KLHL11Q9NVR0 708 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 DKK3Q9UBP4 350 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 ANAPC7Q9UJX3 599 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 HS3ST3A1Q9Y663 406 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 MYLKQ15746 1914 aa18.25■□□□□ 0.51
HDAC5-209ENST00000588703 ACACAQ13085 2346 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 NEMP1O14524 444 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 ENC1O14682 589 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 BUB1BO60566 1050 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-209ENST00000588703 LDOC1O95751 146 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-209ENST00000588703 RARAP10276 462 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 DNAJC3Q13217 504 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 PIGHQ14442 188 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-209ENST00000588703 TMPRSS7Q7RTY8 843 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 POLNQ7Z5Q5 900 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 TTC7BQ86TV6 843 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 ASB12Q8WXK4 309 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 HSPH1Q92598 858 aa18.24■□□□□ 0.51
HDAC5-209ENST00000588703 LENG8Q96PV6 779 aaPredicted RBP18.24■□□□□ 0.51
HDAC5-209ENST00000588703 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.24■□□□□ 0.51
HDAC5-209ENST00000588703 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.24■□□□□ 0.51
HDAC5-209ENST00000588703 TSPAN11A1L157 253 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 TMEM8BA6NDV4 472 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 H3BRJ5 948 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 DFFAO00273 331 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 AMPD1P23109 780 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 EIF4A3P38919 411 aaKnown RBP18.23■□□□□ 0.51
HDAC5-209ENST00000588703 SGCGQ13326 291 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 BOLA3Q53S33 107 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 CCDC157Q569K6 752 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 TPRG1LQ5T0D9 272 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 CCDC122Q5T0U0 273 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 MARCH9Q86YJ5 346 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 SLC25A45Q8N413 288 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 TSEN2Q8NCE0 465 aaKnown RBP18.23■□□□□ 0.51
HDAC5-209ENST00000588703 DENND6BQ8NEG7 585 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 FAM174AQ8TBP5 190 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 TEKT4Q8WW24 435 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 TSC1Q92574 1164 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 CSPG4P5Q96PW8 444 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 UCKL1Q9NWZ5 548 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 IP6K2Q9UHH9 426 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 ZMIZ1Q9ULJ6 1067 aa18.23■□□□□ 0.51
HDAC5-209ENST00000588703 MUSKO15146 869 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 MMP20O60882 483 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 PALMO75781 387 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 CAPNS1P04632 268 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 TPM3P06753 285 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 DGKAP23743 735 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 ACADVLP49748 655 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 IL10RBQ08334 325 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 FZD2Q14332 565 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 SMAD1Q15797 465 aaKnown RBP18.22■□□□□ 0.51
HDAC5-209ENST00000588703 DHRS13Q6UX07 377 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 ZSWIM9Q86XI8 627 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 CPNE8Q86YQ8 564 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 DCP2Q8IU60 420 aaKnown RBP18.22■□□□□ 0.51
HDAC5-209ENST00000588703 ZCCHC14Q8WYQ9 949 aaKnown RBP18.22■□□□□ 0.51
HDAC5-209ENST00000588703 CENPTQ96BT3 561 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 IFT43Q96FT9 208 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 DNAJC7Q99615 494 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 TSPY26PQ9H489 355 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 SUV39H2Q9H5I1 410 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 SP110Q9HB58 689 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 PCDH18Q9HCL0 1135 aa18.22■□□□□ 0.51
HDAC5-209ENST00000588703 IPO11Q9UI26 975 aaKnown RBP18.22■□□□□ 0.51
HDAC5-209ENST00000588703 LRP4O75096 1905 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 TRIM38O00635 465 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 FPGTO14772 594 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 PIAS2O75928 621 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 GIMD1P0DJR0 217 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 IGFALSP35858 605 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 ARL4AP40617 200 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 RABIFP47224 123 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 CSNK1DP48730 415 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 PFN3P60673 137 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 ASTE1Q2TB18 679 aaPredicted RBP18.21■□□□□ 0.51
HDAC5-209ENST00000588703 PROX2Q3B8N5 592 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 TMEM52BQ4KMG9 183 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 ZNF542PQ5EBM4 170 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 SPECC1LQ69YQ0 1117 aa18.21■□□□□ 0.51
HDAC5-209ENST00000588703 SRLQ86TD4 932 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms