RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 TEX26Q8N6G2 289 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 SUMF1Q8NBK3 374 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 HCAR2Q8TDS4 363 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 PDCD6IPQ8WUM4 868 aaKnown RBP12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 ARRDC3Q96B67 414 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 VAT1Q99536 393 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 SAE1Q9UBE0 346 aaPredicted RBP12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 DKK3Q9UBP4 350 aa12.01□□□□□ -0.49
SDHDP1-201ENST00000588055 CEP192Q8TEP8 1941 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 PLK4O00444 970 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 FOXD2O60548 495 aaPredicted RBP12□□□□□ -0.49
SDHDP1-201ENST00000588055 LRP3O75074 770 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 PCDH8O95206 1070 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 CPP00450 1065 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 JCHAINP01591 159 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 HLA-DQB2P05538 268 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 SERPINF2P08697 491 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 NUDT1P36639 197 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 PTGER3P43115 390 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 RGRP47804 291 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 EIF3EP60228 445 aaKnown RBP12□□□□□ -0.49
SDHDP1-201ENST00000588055 SLC45A4Q5BKX6 768 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 KIAA1161Q6NSJ0 714 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 SYT12Q8IV01 421 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 NDUFAF2Q8N183 169 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
SDHDP1-201ENST00000588055 DEFB119Q8N690 84 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 ACTL9Q8TC94 416 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 MAIP1Q8WWC4 291 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 HTR3CQ8WXA8 447 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 PIGKQ92643 395 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 FAM131CQ96AQ9 280 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 TRIM44Q96DX7 344 aaPredicted RBP12□□□□□ -0.49
SDHDP1-201ENST00000588055 PHOX2BQ99453 314 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 SEMA3CQ99985 751 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 MIR1-1HGQ9H1L0 117 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 SUV39H2Q9H5I1 410 aa12□□□□□ -0.49
SDHDP1-201ENST00000588055 C6orf106Q9H6K1 298 aaPredicted RBP12□□□□□ -0.49
SDHDP1-201ENST00000588055 KLHL8Q9P2G9 620 aaPredicted RBP12□□□□□ -0.49
SDHDP1-201ENST00000588055 ZBTB32Q9Y2Y4 487 aaPredicted RBP12□□□□□ -0.49
SDHDP1-201ENST00000588055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12□□□□□ -0.49
SDHDP1-201ENST00000588055 ATXN2Q99700 1313 aaKnown RBP12□□□□□ -0.49
SDHDP1-201ENST00000588055 ANKRD36A6QL64 1941 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 DMDP11532 3685 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 BCLAF3A2AJT9 711 aaKnown RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 METTL12A8MUP2 240 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 UPK3BL1B0FP48 263 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 UPK3BL2E5RIL1 263 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 RNF103O00237 685 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 MUSKO15146 869 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 TSPAN6O43657 245 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 AP1G1O43747 822 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 RBP3P10745 1247 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 CCR5P51681 352 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 EPHB1P54762 984 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ADCY2Q08462 1091 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ZBTB17Q13105 803 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 SETMARQ53H47 684 aaPredicted RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ARMC12Q5T9G4 340 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ALG1LQ6GMV1 187 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ITPRIPL1Q6GPH6 555 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 AADACL2Q6P093 401 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 NEK5Q6P3R8 708 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 DARS2Q6PI48 645 aaKnown RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ADAT2Q7Z6V5 191 aaKnown RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 TTC7BQ86TV6 843 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 PRPF39Q86UA1 669 aaKnown RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 TRIM69Q86WT6 500 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 CAMK1DQ8IU85 385 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 SLC41A1Q8IVJ1 513 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 REXO1L1PQ8IX06 675 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 PGBD5Q8N414 524 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 GPR161Q8N6U8 529 aaKnown RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 C12orf50Q8NA57 414 aaPredicted RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 CEP76Q8TAP6 659 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 CXorf40AQ8TE69 158 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 LRRN4Q8WUT4 740 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 LRRC45Q96CN5 670 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ZNF419Q96HQ0 510 aaPredicted RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 AGAP3Q96P47 875 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 IL12RB2Q99665 862 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 CEP41Q9BYV8 373 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 FRMD8P1Q9BZ68 369 aaPredicted RBP11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 ARRDC1-AS1Q9H2J1 176 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 NOD2Q9HC29 1040 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 VPS45Q9NRW7 570 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 PYCARDQ9ULZ3 195 aa11.99□□□□□ -0.49
SDHDP1-201ENST00000588055 USP34Q70CQ2 3546 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 TSPAN11A1L157 253 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 PRR5-ARHGAP8B1AHC4 643 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 ENC1O14682 589 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 CEP104O60308 925 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 RNGTTO60942 597 aaKnown RBP11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 CFIP05156 583 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 CR2P20023 1033 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 ITPKAP23677 461 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 PTPN3P26045 913 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 CD27P26842 260 aa11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 RPS21P63220 83 aaKnown RBP11.98□□□□□ -0.49
SDHDP1-201ENST00000588055 DSC2Q02487 901 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms