RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.09
VMP1-206ENST00000587945 MBNL1Q9NR56 388 aaKnown RBP14.52□□□□□ -0.09
VMP1-206ENST00000587945 PCSK1NQ9UHG2 260 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 MFHAS1Q9Y4C4 1052 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 DOCK9Q9BZ29 2069 aa14.52□□□□□ -0.09
VMP1-206ENST00000587945 ARID1BQ8NFD5 2236 aaPredicted RBP14.51□□□□□ -0.09
VMP1-206ENST00000587945 OPA1O60313 960 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 BRINP1O60477 761 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 TM7SF2O76062 418 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 ITPKBP27987 946 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 AIF1P55008 147 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 COL9A2Q14055 689 aaPredicted RBP14.51□□□□□ -0.09
VMP1-206ENST00000587945 KLHL40Q2TBA0 621 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 DEFB133Q30KQ1 61 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 E4F1Q66K89 784 aaPredicted RBP14.51□□□□□ -0.09
VMP1-206ENST00000587945 ZNF571Q7Z3V5 609 aaPredicted RBP14.51□□□□□ -0.09
VMP1-206ENST00000587945 RBFAQ8N0V3 343 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 DENND6BQ8NEG7 585 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 CXorf40AQ8TE69 158 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 ARHGEF26Q96DR7 871 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 PEBP4Q96S96 227 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 DHX35Q9H5Z1 703 aaKnown RBP14.51□□□□□ -0.09
VMP1-206ENST00000587945 LRRC19Q9H756 370 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 PDFQ9HBH1 243 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 PARVAQ9NVD7 372 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 UBA2Q9UBT2 640 aaPredicted RBP14.51□□□□□ -0.09
VMP1-206ENST00000587945 PNMA8BQ9ULN7 279 aaPredicted RBP14.51□□□□□ -0.09
VMP1-206ENST00000587945 AP4E1Q9UPM8 1137 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 COQ6Q9Y2Z9 468 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 PCDHB1Q9Y5F3 818 aa14.51□□□□□ -0.09
VMP1-206ENST00000587945 H3BM21 787 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 EEF2KO00418 725 aaKnown RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 FGF10O15520 208 aaPredicted RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 AQP9O43315 295 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 RGRP47804 291 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 PAPOLAP51003 745 aaKnown RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 C1orf61Q13536 156 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 ASIC2Q16515 512 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 SOWAHCQ53LP3 525 aaPredicted RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 PLEKHA7Q6IQ23 1121 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 CACTIN-AS1Q8N1I8 211 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 FAM181AQ8N9Y4 354 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 IFI44Q8TCB0 444 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 VCPIP1Q96JH7 1222 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 NAP1L5Q96NT1 182 aaPredicted RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 KCTD15Q96SI1 283 aaPredicted RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 NCAPGQ9BPX3 1015 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 SNRNP25Q9BV90 132 aaKnown RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 DUSP23Q9BVJ7 150 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 SLC39A8Q9C0K1 460 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 NAT10Q9H0A0 1025 aaKnown RBP14.5□□□□□ -0.09
VMP1-206ENST00000587945 HAUS4Q9H6D7 363 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 DKK3Q9UBP4 350 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 MYO6Q9UM54 1294 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 DOCK4Q8N1I0 1966 aa14.5□□□□□ -0.09
VMP1-206ENST00000587945 TP53BP1Q12888 1972 aaPredicted RBP14.49□□□□□ -0.09
VMP1-206ENST00000587945 ITPR1Q14643 2758 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 CPED1A4D0V7 1026 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 BUB1BO60566 1050 aaPredicted RBP14.49□□□□□ -0.09
VMP1-206ENST00000587945 PRAMEF11O60813 436 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 GCATO75600 419 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 FTLP02792 175 aaPredicted RBP14.49□□□□□ -0.09
VMP1-206ENST00000587945 PRKCGP05129 697 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 DESP17661 470 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 XPAP23025 273 aaPredicted RBP14.49□□□□□ -0.09
VMP1-206ENST00000587945 EIF2S3P41091 472 aaKnown RBP14.49□□□□□ -0.09
VMP1-206ENST00000587945 ABCG1P45844 678 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 NDST2P52849 883 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 THOP1P52888 689 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 CDKN3Q16667 212 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 CDCP2Q5VXM1 449 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 GUSBP11Q6P575 273 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 ZSWIM9Q86XI8 627 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 CAMK1DQ8IU85 385 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 TP53I13Q8NBR0 393 aaPredicted RBP14.49□□□□□ -0.09
VMP1-206ENST00000587945 CPEB1Q9BZB8 566 aaKnown RBP14.49□□□□□ -0.09
VMP1-206ENST00000587945 SUV39H2Q9H5I1 410 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 PCDH12Q9NPG4 1184 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 CSNK1G3Q9Y6M4 447 aa14.49□□□□□ -0.09
VMP1-206ENST00000587945 NBEAQ8NFP9 2946 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 TMEM191CA6NGB0 347 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 SMTNL1A8MU46 457 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.093e-8■■■□□ 15.8
VMP1-206ENST00000587945 DAPK3O43293 454 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 MPOP05164 745 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 SKILP12757 684 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 MIPP30301 263 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 HTR7P34969 479 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 EIF4A3P38919 411 aaKnown RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 DUSP3P51452 185 aaPredicted RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 ADKP55263 362 aaKnown RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 PTK2BQ14289 1009 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 IRF4Q15306 451 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 TCEA2Q15560 299 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 UGP2Q16851 508 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 WSCD2Q2TBF2 565 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 TMEM52BQ4KMG9 183 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 FILIP1LQ4L180 1135 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 PRRT3Q5FWE3 981 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 ERMARDQ5T6L9 678 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms