RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 RASA4BC9J798 803 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 INSIG1O15503 277 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 RASA4O43374 803 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 MMP20O60882 483 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 USP12O75317 370 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 GCATO75600 419 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 IGSF6O95976 241 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 PRB1P04280 392 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 CALB1P05937 261 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 TPM2P07951 284 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 TGM2P21980 687 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 DUSP3P51452 185 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 RPL7AP62424 266 aaKnown RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 EFHC2Q5JST6 749 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 DNAJC24Q6P3W2 148 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 RBM43Q6ZSC3 357 aaKnown RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 EFL1Q7Z2Z2 1120 aaKnown RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 TTC7BQ86TV6 843 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 EXOC2Q96KP1 924 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 MCEEQ96PE7 176 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 WRAP53Q9BUR4 548 aaKnown RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 LRRC61Q9BV99 259 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 TTYH3Q9C0H2 523 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 SEPT11Q9NVA2 429 aaKnown RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 EVA1BQ9NVM1 165 aa14.18□□□□□ -0.14
ATG4D-206ENST00000586863 APOBEC3BQ9UH17 382 aaKnown RBP14.18□□□□□ -0.14
ATG4D-206ENST00000586863 A0A1W2PNU3 283 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 CPED1A4D0V7 1026 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 CASC3O15234 703 aaKnown RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 CREB3O43889 395 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 LZTS3O60299 673 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 TM7SF2O76062 418 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 PIGNO95427 931 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 TIMP2P16035 220 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 ZNF143P52747 638 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 THOP1P52888 689 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 RHOAP61586 193 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 C1orf61Q13536 156 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 SCYL2Q6P3W7 929 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 CRTC1Q6UUV9 634 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 PHACTR4Q8IZ21 702 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 TP53I13Q8NBR0 393 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 NEK11Q8NG66 645 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 CXorf40AQ8TE69 158 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 CASKIN2Q8WXE0 1202 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 NAF1Q96HR8 494 aaKnown RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 HIC2Q96JB3 615 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 PCMTD1Q96MG8 357 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 ZNF578Q96N58 590 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 LGMNQ99538 433 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 IL12RB2Q99665 862 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 ANP32EQ9BTT0 268 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 ABCG4Q9H172 646 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 MBNL1Q9NR56 388 aaKnown RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 SPASTQ9UBP0 616 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 LIMA1Q9UHB6 759 aaKnown RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 SALL4Q9UJQ4 1053 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 FZD10Q9ULW2 581 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 MFHAS1Q9Y4C4 1052 aa14.17□□□□□ -0.14
ATG4D-206ENST00000586863 ARHGEF17Q96PE2 2063 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-206ENST00000586863 EME2A4GXA9 379 aaPredicted RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 WASH4PA8MWX3 477 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 TPP1O14773 563 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 ATXN7O15265 892 aaPredicted RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 C1QL1O75973 258 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 DXOO77932 396 aaKnown RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 CELA2BP08218 269 aaPredicted RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 LSSP48449 732 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 PCBP4P57723 403 aaKnown RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 YBEYP58557 167 aaPredicted RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 OGDHQ02218 1023 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 UBXN1Q04323 297 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 RAD51Q06609 339 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 SERINC3Q13530 473 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 PTK2BQ14289 1009 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 IRF4Q15306 451 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 CYTH1Q15438 398 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 NR0B2Q15466 257 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 ISXQ2M1V0 245 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 KLHL40Q2TBA0 621 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 PARP15Q460N3 678 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 INO80DQ53TQ3 878 aaPredicted RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 PRRT3Q5FWE3 981 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 PERM1Q5SV97 790 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 PPP1R15BQ5SWA1 713 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 MACC1Q6ZN28 852 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 APTXQ7Z2E3 356 aaKnown RBP14.16□□□□□ -0.14
ATG4D-206ENST00000586863 SLC35F3Q8IY50 421 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 ZNF248Q8NDW4 579 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 EPAS1Q99814 870 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 AGPAT1Q99943 283 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 BOCQ9BWV1 1114 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 CLPBQ9H078 707 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 POLR1BQ9H9Y6 1135 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 ASCL3Q9NQ33 180 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 NCKIPSDQ9NZQ3 722 aa14.16□□□□□ -0.14
ATG4D-206ENST00000586863 DKK3Q9UBP4 350 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms