RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CHD8Q9HCK8 2581 aa16.33■□□□□ 0.2
ATG4D-205ENST00000586477 C4orf47A7E2U8 309 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 TTC34A8MYJ7 566 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 J3KR12 359 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 ATP9BO43861 1147 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 SNAP91O60641 907 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 SIN3BO75182 1162 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 MAOBP27338 520 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 MMP13P45452 471 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 STK19P49842 368 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-205ENST00000586477 GRM3Q14832 879 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 HNRNPA1L2Q32P51 320 aaKnown RBP16.32■□□□□ 0.2
ATG4D-205ENST00000586477 RALGPS1Q5JS13 557 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 C9orf64Q5T6V5 341 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 ITPRIPL1Q6GPH6 555 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 GSTA5Q7RTV2 222 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 PLPP6Q8IY26 295 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 SH2D3CQ8N5H7 860 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 CCDC89Q8N998 374 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 KNL1Q8NG31 2342 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 CCHCR1Q8TD31 782 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 ATG4AQ8WYN0 398 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 CNTNAP3BQ96NU0 1288 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 PSKH2Q96QS6 385 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 GPR174Q9BXC1 333 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 CNTNAP3Q9BZ76 1288 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 FBRSQ9HAH7 460 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 SUN2Q9UH99 717 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 R3HDM2Q9Y2K5 976 aaKnown RBP16.32■□□□□ 0.2
ATG4D-205ENST00000586477 SLCO1B1Q9Y6L6 691 aa16.32■□□□□ 0.2
ATG4D-205ENST00000586477 CTAGE15A4D2H0 777 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 KCNN4O15554 427 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 OPHN1O60890 802 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 CTAGE8P0CG41 777 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 SRCP12931 536 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 HOXD12P35452 270 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 SNRPD1P62314 119 aaKnown RBP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 RAD51Q06609 339 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 OASLQ15646 514 aaKnown RBP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 ACCSLQ4AC99 568 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 CCDC137Q6PK04 289 aaKnown RBP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 ARHGAP36Q6ZRI8 547 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 SYDE1Q6ZW31 735 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 CTAGE6Q86UF2 777 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 FAM124AQ86V42 546 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 CTAGE4Q8IX94 777 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 TP53INP2Q8IXH6 220 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 TEX26Q8N6G2 289 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 SPATA4Q8NEY3 305 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 DNASE2BQ8WZ79 361 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 LRRC45Q96CN5 670 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 RPL10LQ96L21 214 aaKnown RBP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 IL12RB2Q99665 862 aa16.31■□□□□ 0.2
ATG4D-205ENST00000586477 POLR1EQ9GZS1 481 aaKnown RBP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 RSPH9Q9H1X1 276 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-205ENST00000586477 PCNX2A6NKB5 2137 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 EDDM13A0A1B0GTR0 161 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 TARSL2A2RTX5 802 aaKnown RBP16.3■□□□□ 0.2
ATG4D-205ENST00000586477 GOLGA6CA6NDK9 693 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 GOLGA6BA6NDN3 693 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 KCNK1O00180 336 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 RNF103O00237 685 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 NDUFS2O75306 463 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 TMCC1O94876 653 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 IGSF6O95976 241 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 GSRP00390 522 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 GOLGA6DP0CG33 693 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 VAV1P15498 845 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 ENGP17813 658 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 GLDCP23378 1020 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 RBL1P28749 1068 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 ACSL1P33121 698 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 COILP38432 576 aaPredicted RBP16.3■□□□□ 0.2
ATG4D-205ENST00000586477 RHOAP61586 193 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 SNX1Q13596 522 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 DHX34Q14147 1143 aaKnown RBP16.3■□□□□ 0.2
ATG4D-205ENST00000586477 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 P3H1Q32P28 736 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 TEX44Q53QW1 395 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 C22orf39Q6P5X5 142 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 LINGO4Q6UY18 593 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 MAATS1Q7Z4T9 603 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 DSG4Q86SJ6 1040 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 C1orf216Q8TAB5 229 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 SLCO2A1Q92959 643 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 RTP4Q96DX8 246 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 GDAP1L1Q96MZ0 367 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 FAM129BQ96TA1 746 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 TMEM121Q9BTD3 319 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 TMEM9BQ9NQ34 198 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 RBM22Q9NW64 420 aaKnown RBP eCLIP16.3■□□□□ 0.2
ATG4D-205ENST00000586477 GOLGA6AQ9NYA3 693 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 SEPT10Q9P0V9 454 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 KLHL8Q9P2G9 620 aaPredicted RBP16.3■□□□□ 0.2
ATG4D-205ENST00000586477 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 CEP295Q9C0D2 2601 aa16.3■□□□□ 0.2
ATG4D-205ENST00000586477 EPG5Q9HCE0 2579 aa16.29■□□□□ 0.2
ATG4D-205ENST00000586477 C5orf60A6NFR6 353 aa16.29■□□□□ 0.2
ATG4D-205ENST00000586477 METTL12A8MUP2 240 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms