RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 ERLIN1O75477 346 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 POP4O95707 220 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 CER1O95813 267 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 IGSF6O95976 241 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 PEX11BO96011 259 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 CD48P09326 243 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TBC1D3HP0C7X1 549 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 CEACAM1P13688 526 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 H2AFXP16104 143 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 CD38P28907 300 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 GKP32189 559 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ARL4AP40617 200 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ABL2P42684 1182 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 CSNK1DP48730 415 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 CSNK1EP49674 416 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 PAPOLAP51003 745 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ATXN3P54252 364 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 HADHBP55084 474 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 NAP1L1P55209 391 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TAS2R40P59535 323 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 RHOAP61586 193 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 CCDC15Q0P6D6 951 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 DPYSL3Q14195 570 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 RFTN1Q14699 578 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TEAD4Q15561 434 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 KIF19Q2TAC6 998 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF284Q2VY69 593 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 HLA-BQ31612 363 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 MYLK3Q32MK0 819 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 SETMARQ53H47 684 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF805Q5CZA5 627 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ATXN7L2Q5T6C5 722 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TBC1D3GQ6DHY5 549 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TBC1D3CQ6IPX1 549 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TMCO3Q6UWJ1 677 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 LAYNQ6UX15 382 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ARHGAP36Q6ZRI8 547 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 IQCHQ86VS3 1027 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 HORMAD1Q86X24 394 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TP53INP2Q8IXH6 220 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 RHOT2Q8IXI1 618 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TBC1D3Q8IZP1 549 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 OR6K2Q8NGY2 324 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 BAHD1Q8TBE0 780 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 UBE2Q2Q8WVN8 375 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 RFFLQ8WZ73 363 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 HSPH1Q92598 858 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 RAB7BQ96AH8 199 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 FAF2Q96CS3 445 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF599Q96NL3 588 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF670Q9BS34 389 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 GTPBP2Q9BX10 602 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 GAREM1Q9H706 876 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 IL21RQ9HBE5 538 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 GPR27Q9NS67 375 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 DKK3Q9UBP4 350 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 UBA2Q9UBT2 640 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ZFR2Q9UPR6 939 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 ANKRD6Q9Y2G4 727 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 FNDC3AQ9Y2H6 1198 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 PCDHGB2Q9Y5G2 931 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 FADS3Q9Y5Q0 445 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 SNX11Q9Y5W9 270 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 V9GYY5 206 aaPredicted RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 TDRD6O60522 2096 aaKnown RBP8.75□□□□□ -1.01
ATG4D-202ENST00000585437 KNL1Q8NG31 2342 aa8.75□□□□□ -1.01
ATG4D-202ENST00000585437 A0A1W2PQU0 124 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 CCDC151A5D8V7 595 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 C16orf96A6NNT2 1141 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF487B1APH4 448 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 KRIT1O00522 736 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 GIPC1O14908 333 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 ATP8B1O43520 1251 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 PCDHGA12O60330 932 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 MAFKO60675 156 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 RNGTTO60942 597 aaKnown RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 CBFA2T3O75081 653 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 ATP1A1P05023 1023 aaKnown RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 UGT2B4P06133 528 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 AMPD1P23109 780 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 SERPINB6P35237 376 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 RGRP47804 291 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 DNA2P51530 1060 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 CDH6P55285 790 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 OVGP1Q12889 678 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 GRM3Q14832 879 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 BRD3Q15059 726 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 PAFAH1B3Q15102 231 aaKnown RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 HADHQ16836 314 aaKnown RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 UAP1L1Q3KQV9 507 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 NCBP2-AS2Q69YL0 99 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 KIAA1161Q6NSJ0 714 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 FBXO38Q6PIJ6 1188 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 PRPF39Q86UA1 669 aaKnown RBP8.74□□□□□ -1.01
ATG4D-202ENST00000585437 VSIG1Q86XK7 387 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 ZNF354CQ86Y25 554 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 SYCE1Q8N0S2 351 aa8.74□□□□□ -1.01
ATG4D-202ENST00000585437 MFSD2AQ8NA29 543 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms