RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 SPATA22Q8NHS9 363 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 PPP1R16AQ96I34 528 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 ERP44Q9BS26 406 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 SUV39H2Q9H5I1 410 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 ETNK1Q9HBU6 452 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 EIF2B3Q9NR50 452 aaKnown RBP11.78□□□□□ -0.52
CDRT1-207ENST00000583965 DLGAP2Q9P1A6 1054 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 PPM1HQ9ULR3 514 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 SCML1Q9UN30 329 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 WASF2Q9Y6W5 498 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 DOCK9Q9BZ29 2069 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 NUMA1Q14980 2115 aa11.78□□□□□ -0.52
CDRT1-207ENST00000583965 E7EVH7 732 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 SMAPO00193 183 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ALDH1A2O94788 518 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 PAPSS2O95340 614 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 AP2A1O95782 977 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 MT-CYBP00156 380 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 EPOP01588 193 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 CTSLP07711 333 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 TPSB2P20231 275 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 COL9A1P20849 921 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ADCY8P40145 1251 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 MAGEA6P43360 314 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 VPS41P49754 854 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 CCR3P51677 355 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 COPAP53621 1224 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 DRG2P55039 364 aaKnown RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 RPL26P61254 145 aaKnown RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 BASP1P80723 227 aaKnown RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 SATB1Q01826 763 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ZBTB16Q05516 673 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 SFSWAPQ12872 951 aaKnown RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 NAA30Q147X3 362 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 TPSAB1Q15661 275 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ZNF805Q5CZA5 627 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ARMC12Q5T9G4 340 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 KCTD11Q693B1 232 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 BRAT1Q6PJG6 821 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 KDELC1Q6UW63 502 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 TMEM92Q6UXU6 159 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 GDPD4Q6W3E5 623 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 PRUNE1Q86TP1 453 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 MMAAQ8IVH4 418 aaKnown RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 BBOF1Q8ND07 529 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 OR6K2Q8NGY2 324 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 PIP4K2CQ8TBX8 421 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 GRIN3AQ8TCU5 1115 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 PBXIP1Q96AQ6 731 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 VOPP1Q96AW1 172 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 OXNAD1Q96HP4 312 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 FEM1CQ96JP0 617 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 GORASP1Q9BQQ3 440 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 TRIM51Q9BSJ1 452 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 LRRC1Q9BTT6 524 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 MLPHQ9BV36 600 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 FSD1LQ9BXM9 530 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 TDRD1Q9BXT4 1180 aaKnown RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 ANKZF1Q9H8Y5 726 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 LRRC40Q9H9A6 602 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 DKK3Q9UBP4 350 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 RAB21Q9UL25 225 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 RPL26L1Q9UNX3 145 aaKnown RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 RAI2Q9Y5P3 530 aa11.77□□□□□ -0.53
CDRT1-207ENST00000583965 V9GYY5 206 aaPredicted RBP11.77□□□□□ -0.53
CDRT1-207ENST00000583965 TCRBV21S2A2A0A5A6 115 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 TSPAN11A1L157 253 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 TTC24A2A3L6 582 aaPredicted RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 KPNA3O00505 521 aaPredicted RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 TRAFD1O14545 582 aaPredicted RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 DNALI1O14645 258 aaPredicted RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 FZD6O60353 706 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 PMPCBO75439 489 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 GJB3O75712 270 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 PIGNO95427 931 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 IL1BP01584 269 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 UGT2B4P06133 528 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 APRTP07741 180 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 H2AFXP16104 143 aaPredicted RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 C5AR1P21730 350 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 NFKBIAP25963 317 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 ITGB7P26010 798 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 IVDP26440 423 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 GKP32189 559 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 CXCL12P48061 93 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 LMAN1P49257 510 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 SUOXP51687 545 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 WNT3AP56704 352 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 POLR2LP62875 67 aaKnown RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 SARNPP82979 210 aaKnown RBP11.76□□□□□ -0.53
CDRT1-207ENST00000583965 CDK18Q07002 472 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 CCDC15Q0P6D6 951 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 TRAF2Q12933 501 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 MTAPQ13126 283 aa11.76□□□□□ -0.53
CDRT1-207ENST00000583965 IHHQ14623 411 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms