RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 CELF6Q96J87 481 aaKnown RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 ATP6V1G3Q96LB4 118 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 SIGLEC10Q96LC7 697 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 SLC22A12Q96S37 553 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 NAT9Q9BTE0 207 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 SCUBE2Q9NQ36 999 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 KLHL8Q9P2G9 620 aaPredicted RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 AAR2Q9Y312 384 aaKnown RBP12.13□□□□□ -0.47
GGA3-217ENST00000583667 ANAPC1Q9H1A4 1944 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 MYO18BQ8IUG5 2567 aa12.13□□□□□ -0.47
GGA3-217ENST00000583667 A0A1B0GVM2 712 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 E2F8A0AVK6 867 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 GOLGA6CA6NDK9 693 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 TCAF2A6NFQ2 919 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 H0Y626 953 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 DFFAO00273 331 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 ARNTLO00327 626 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 TRDMT1O14717 391 aaKnown RBP12.12□□□□□ -0.47
GGA3-217ENST00000583667 KHNYNO15037 678 aaKnown RBP12.12□□□□□ -0.47
GGA3-217ENST00000583667 RNF40O75150 1001 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 MOSPD3O75425 235 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 TRIM16O95361 564 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 SHBGP04278 402 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 RHOP08100 348 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 GOLGA6DP0CG33 693 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 OR1E1P30953 314 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 PHBP35232 272 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 ETFBP38117 255 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 IRAK1P51617 712 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 FAM193AP78312 1265 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 ZXDBP98169 803 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 GAD2Q05329 585 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 PRPSAP1Q14558 356 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 POLD3Q15054 466 aaPredicted RBP12.12□□□□□ -0.47
GGA3-217ENST00000583667 ZNF605Q86T29 641 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 CCDC117Q8IWD4 279 aaPredicted RBP12.12□□□□□ -0.47
GGA3-217ENST00000583667 ZBED8Q8IZ13 594 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 RIBC1Q8N443 379 aaPredicted RBP12.12□□□□□ -0.47
GGA3-217ENST00000583667 CCDC33Q8N5R6 958 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 LRRN4Q8WUT4 740 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 ARL8AQ96BM9 186 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 MYEOVQ96EZ4 313 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 C9orf72Q96LT7 481 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 CYP2S1Q96SQ9 504 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 GORASP1Q9BQQ3 440 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 SLC46A2Q9BY10 475 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
GGA3-217ENST00000583667 ATXN3LQ9H3M9 355 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 SLC32A1Q9H598 525 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 CCDC86Q9H6F5 360 aaKnown RBP12.12□□□□□ -0.47
GGA3-217ENST00000583667 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 GLOD4Q9HC38 313 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 GOLGA6AQ9NYA3 693 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 RAXQ9Y2V3 346 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 CPQQ9Y646 472 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 ZNF462Q96JM2 2506 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 DOCK4Q8N1I0 1966 aa12.12□□□□□ -0.47
GGA3-217ENST00000583667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 MAGEB16A2A368 324 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 TK2O00142 265 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 ZNF197O14709 1029 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 RASGRF2O14827 1237 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 KDELR3O43731 214 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 PRAMEF11O60813 436 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 ANXA9O76027 345 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 IVLP07476 585 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 PSMB4P28070 264 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 SOX9P48436 509 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 NPY2RP49146 381 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 GPX6P59796 221 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 GNA12Q03113 381 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 ZNF177Q13360 481 aaPredicted RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 FRG1Q14331 258 aaKnown RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 RFTN1Q14699 578 aaPredicted RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 SLC14A2Q15849 920 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 TTMPQ5BVD1 217 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 PRSS36Q5K4E3 855 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 ALG1LQ6GMV1 187 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 LINC00523Q86TU6 105 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 OR2W6PQ8NHA6 318 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 SHKBP1Q8TBC3 707 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 ARHGEF2Q92974 986 aaKnown RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 WBP2Q969T9 261 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 TADA1Q96BN2 335 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 TLCD1Q96CP7 247 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 HMCESQ96FZ2 354 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 PRICKLE1Q96MT3 831 aaPredicted RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 ASB16Q96NS5 453 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 EBNA1BP2Q99848 306 aaKnown RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 CORO1BQ9BR76 489 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 WDR83Q9BRX9 315 aaKnown RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 STMN4Q9H169 189 aaPredicted RBP12.11□□□□□ -0.47
GGA3-217ENST00000583667 SLC25A51Q9H1U9 297 aa12.11□□□□□ -0.47
GGA3-217ENST00000583667 LRRC40Q9H9A6 602 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms