RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ADCY5O95622 1261 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 PRKCGP05129 697 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 CCL4P13236 92 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 XPAP23025 273 aaPredicted RBP11.27□□□□□ -0.61
CASC3-208ENST00000583649 KELP23276 732 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 OR1E1P30953 314 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 IGFALSP35858 605 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 DCTP40126 519 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 CCNHP51946 323 aaPredicted RBP11.27□□□□□ -0.61
CASC3-208ENST00000583649 SNX16P57768 344 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 RAD51Q06609 339 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 CETN1Q12798 172 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 NFATC4Q14934 902 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 C16orf72Q14CZ0 275 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 LRRC14Q15048 493 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 TSR1Q2NL82 804 aaKnown RBP11.27□□□□□ -0.61
CASC3-208ENST00000583649 AMZ1Q400G9 498 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 TPRG1LQ5T0D9 272 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 ZNF787Q6DD87 383 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 ZNF783Q6ZMS7 281 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 TTC7BQ86TV6 843 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 PLPP6Q8IY26 295 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 NRSN1Q8IZ57 195 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 SLC34A3Q8N130 599 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 STK32AQ8WU08 396 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 ART4Q93070 314 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 TSACCQ96A04 125 aaPredicted RBP11.27□□□□□ -0.61
CASC3-208ENST00000583649 RBM15Q96T37 977 aaKnown RBP eCLIP11.27□□□□□ -0.613e-8■■■■■ 27.2
CASC3-208ENST00000583649 SPON2Q9BUD6 331 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 RUBCNLQ9H714 662 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 COX16Q9P0S2 106 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 HECAQ9UBI9 543 aaPredicted RBP11.27□□□□□ -0.61
CASC3-208ENST00000583649 WASF2Q9Y6W5 498 aa11.27□□□□□ -0.61
CASC3-208ENST00000583649 ANKRD17O75179 2603 aaKnown RBP11.27□□□□□ -0.61
CASC3-208ENST00000583649 CETN3O15182 167 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 SMAD6O43541 496 aaKnown RBP11.26□□□□□ -0.61
CASC3-208ENST00000583649 SNAP91O60641 907 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 IGLV3-25P01717 112 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 GLI1P08151 1106 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
CASC3-208ENST00000583649 FGF3P11487 239 aaPredicted RBP11.26□□□□□ -0.61
CASC3-208ENST00000583649 ALDH4A1P30038 563 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 ETFBP38117 255 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 UQCRFS1P47985 274 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 SERPINH1P50454 418 aaKnown RBP11.26□□□□□ -0.61
CASC3-208ENST00000583649 ABHD18Q0P651 414 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 TCEA2Q15560 299 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 ALG11Q2TAA5 492 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 DCAF17Q5H9S7 520 aaPredicted RBP11.26□□□□□ -0.61
CASC3-208ENST00000583649 EFHC1Q5JVL4 640 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 C16orf46Q6P387 395 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 OGFOD3Q6PK18 319 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 SHC4Q6S5L8 630 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 LINGO4Q6UY18 593 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 FAM129CQ86XR2 697 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 SRRM1Q8IYB3 904 aaKnown RBP11.26□□□□□ -0.61
CASC3-208ENST00000583649 STARD8Q92502 1023 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 WDR92Q96MX6 357 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 SIK2Q9H0K1 926 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 RDH14Q9HBH5 336 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 CASS4Q9NQ75 786 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 DKK3Q9UBP4 350 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 B3GALT1Q9Y5Z6 326 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 DGKBQ9Y6T7 804 aa11.26□□□□□ -0.61
CASC3-208ENST00000583649 ICE1Q9Y2F5 2266 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 CXorf51AA0A1B0GTR3 108 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 B4DGG1 531 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 B4E171 279 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 CACNB4O00305 520 aaPredicted RBP11.25□□□□□ -0.61
CASC3-208ENST00000583649 SYT1P21579 422 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 TSPAN7P41732 249 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 GPR3P46089 330 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 PPM1FP49593 454 aaPredicted RBP11.25□□□□□ -0.61
CASC3-208ENST00000583649 SUOXP51687 545 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 SNRPD1P62314 119 aaKnown RBP11.25□□□□□ -0.61
CASC3-208ENST00000583649 ELP6Q0PNE2 266 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 NME3Q13232 169 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.61
CASC3-208ENST00000583649 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 CEACAM20Q6UY09 585 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 IRF2BP1Q8IU81 584 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 RCBTB1Q8NDN9 531 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 OR4D9Q8NGE8 314 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 OR52K2Q8NGK3 314 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 TFAP2BQ92481 460 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 ISG20Q96AZ6 181 aaKnown RBP11.25□□□□□ -0.61
CASC3-208ENST00000583649 CCDC74BQ96LY2 380 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 NT5C1BQ96P26 610 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 PSMB7Q99436 277 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 ATP13A1Q9HD20 1204 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 HPCAL4Q9UM19 191 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 COQ4Q9Y3A0 265 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 HS3ST4Q9Y661 456 aa11.25□□□□□ -0.61
CASC3-208ENST00000583649 NBASA2RRP1 2371 aa11.24□□□□□ -0.61
CASC3-208ENST00000583649 IGHV5-10-1A0A0J9YXX1 117 aa11.24□□□□□ -0.61
CASC3-208ENST00000583649 ILVBLA1L0T0 632 aa11.24□□□□□ -0.61
CASC3-208ENST00000583649 PDE2AO00408 941 aaPredicted RBP11.24□□□□□ -0.61
CASC3-208ENST00000583649 KRIT1O00522 736 aa11.24□□□□□ -0.61
CASC3-208ENST00000583649 KLRC4O43908 158 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms