RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 KLHL24Q6TFL4 600 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 IL20RBQ6UXL0 311 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 NEK10Q6ZWH5 1172 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 NOL8Q76FK4 1167 aaKnown RBP4.17□□□□□ -1.74
COPS3-217ENST00000583160 PRSS45Q7RTY3 260 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 FTSJ3Q8IY81 847 aaKnown RBP4.17□□□□□ -1.74
COPS3-217ENST00000583160 MUC20Q8N307 709 aaPredicted RBP4.17□□□□□ -1.74
COPS3-217ENST00000583160 ENAHQ8N8S7 591 aaPredicted RBP4.17□□□□□ -1.74
COPS3-217ENST00000583160 CEP70Q8NHQ1 597 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 RFWD2Q8NHY2 731 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 TMEM170AQ8WVE7 144 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 BICD1Q96G01 975 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 IFT80Q9P2H3 777 aaPredicted RBP4.17□□□□□ -1.74
COPS3-217ENST00000583160 FEM1BQ9UK73 627 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 SUFUQ9UMX1 484 aa4.17□□□□□ -1.74
COPS3-217ENST00000583160 RRP7AQ9Y3A4 280 aaKnown RBP4.17□□□□□ -1.74
COPS3-217ENST00000583160 MYO15BQ96JP2 1530 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 RB1CC1Q8TDY2 1594 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 MAGEA13PA6NCF6 341 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 ANP32CO43423 234 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 IGLV2-11P01706 119 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 AFPP02771 609 aaKnown RBP4.16□□□□□ -1.74
COPS3-217ENST00000583160 CHRM4P08173 479 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 KRTAP27-1Q3LI81 207 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 ADCK5Q3MIX3 580 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 ANKRD45Q5TZF3 282 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 CCDC129Q6ZRS4 1044 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 LURAP1LQ8IV03 231 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 CCDC105Q8IYK2 499 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 GDPD5Q8WTR4 605 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 SH3KBP1Q96B97 665 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 LRFN5Q96NI6 719 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 IL17FQ96PD4 163 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 NOD2Q9HC29 1040 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 TCF7L2Q9NQB0 619 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 DONSONQ9NYP3 566 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 GDAQ9Y2T3 454 aa4.16□□□□□ -1.74
COPS3-217ENST00000583160 NACADO15069 1562 aa4.15□□□□□ -1.74
COPS3-217ENST00000583160 NPIPB11E5RHQ5 1161 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 CLGNO14967 610 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 GAS8-AS1O95177 125 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 PLGP00747 810 aaPredicted RBP4.15□□□□□ -1.75
COPS3-217ENST00000583160 WEE2P0C1S8 567 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 SSTR2P30874 369 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 CXCR3P49682 368 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 ILF3Q12906 894 aaKnown RBP eCLIP4.15□□□□□ -1.75
COPS3-217ENST00000583160 TAF5Q15542 800 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 EDRF1Q3B7T1 1238 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 KRTAP24-1Q3LI83 254 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 FAM69BQ5VUD6 431 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 GSG1LQ6UXU4 331 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 SFTPA2Q8IWL1 248 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 POC1AQ8NBT0 407 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 SPATA20Q8TB22 786 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 ARRDC2Q8TBH0 407 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 SPPL3Q8TCT6 385 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 MTBPQ96DY7 904 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 NODALQ96S42 347 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 CLSTN3Q9BQT9 956 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 NDRG3Q9UGV2 375 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 ADGRF5Q8IZF2 1346 aa4.15□□□□□ -1.75
COPS3-217ENST00000583160 GREB1LQ9C091 1923 aaPredicted RBP4.15□□□□□ -1.75
COPS3-217ENST00000583160 A0A0B4J293 547 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 hDV102S1A0JD36 115 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 TYW5A2RUC4 315 aaKnown RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 PRAC2D3DTV9 90 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 BMPR1BO00238 502 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 ATP2C2O75185 946 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 RGS11O94810 467 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 IGHV4-30-4P0DP06 118 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 HDAC4P56524 1084 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 CALCRLQ16602 461 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 SETMARQ53H47 684 aaPredicted RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 CES5AQ6NT32 575 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 ZNF771Q7L3S4 317 aaPredicted RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 SHFQ7M4L6 423 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 EXOC3L1Q86VI1 746 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 TMPRSS12Q86WS5 348 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 SUGP1Q8IWZ8 645 aaKnown RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 CPXM2Q8N436 756 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 RAB40AQ8WXH6 277 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 CNOT9Q92600 299 aaKnown RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 OR1F2PQ96R84 312 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 MMTAG2Q9BU76 263 aaKnown RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 LMAN2LQ9H0V9 348 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 SLC32A1Q9H598 525 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 STN1Q9H668 368 aaKnown RBP4.14□□□□□ -1.75
COPS3-217ENST00000583160 RASSF1Q9NS23 344 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 PCDHGB5Q9Y5G0 923 aa4.14□□□□□ -1.75
COPS3-217ENST00000583160 ARHGAP10A1A4S6 786 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 SH2D7A6NKC9 451 aaPredicted RBP4.13□□□□□ -1.75
COPS3-217ENST00000583160 CYSRT1A8MQ03 144 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 PRSS47A8MTI9 375 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 TULP2O00295 520 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 EBAG9O00559 213 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 PEX12O00623 359 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 HSPA12AO43301 675 aa4.13□□□□□ -1.75
COPS3-217ENST00000583160 CEP104O60308 925 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms