RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 PLCL1Q15111 1095 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 NFE2Q16621 373 aaPredicted RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 TFDP3Q5H9I0 405 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 CCNI2Q6ZMN8 369 aaPredicted RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 LPCAT2Q7L5N7 544 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 SLC26A9Q7LBE3 791 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 PIGZQ86VD9 579 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 SPATA2LQ8IUW3 424 aaPredicted RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 FUKQ8N0W3 1084 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 DPH2Q9BQC3 489 aaPredicted RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 RSRP1Q9BUV0 290 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 GTPBP2Q9BX10 602 aaKnown RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 MAK16Q9BXY0 300 aaKnown RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 OSBPL8Q9BZF1 889 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 ZWILCHQ9H900 591 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 EPB41L5Q9HCM4 733 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 ZDHHC4Q9NPG8 344 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 TMEM74BQ9NUR3 256 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 STAP1Q9ULZ2 295 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 NME7Q9Y5B8 376 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 CORINQ9Y5Q5 1042 aa10.51□□□□□ -0.73
SS18-221ENST00000582448 ATXN2Q99700 1313 aaKnown RBP10.51□□□□□ -0.73
SS18-221ENST00000582448 KRTAP9-6A0A140TA67 174 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 C2CD4BA6NLJ0 364 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 CAPN9O14815 690 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 PAPSS1O43252 624 aaPredicted RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 RAD51CO43502 376 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 HCRTO43612 131 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 LRCH4O75427 683 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 GRAP2O75791 330 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 KLF8O95600 359 aaPredicted RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 NFATC1O95644 943 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 RALAP11233 206 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 ENGP17813 658 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 FUT4P22083 530 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 PTPN7P35236 360 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 RDXP35241 583 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 OPRD1P41143 372 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 PTGER3P43115 390 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 PTPN9P43378 593 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 SLC6A11P48066 632 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 RPL34P49207 117 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 TKTL1P51854 596 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 YWHAZP63104 245 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 SLC7A5Q01650 507 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 OGDHQ02218 1023 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 ADIGQ0VDE8 80 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 HLTFQ14527 1009 aaKnown RBP eCLIP10.5□□□□□ -0.73
SS18-221ENST00000582448 KRT81Q14533 505 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 CRY1Q16526 586 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 BOLA3Q53S33 107 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 EMC10Q5UCC4 262 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 SCYL2Q6P3W7 929 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 EMBQ6PCB8 327 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 CCDC137Q6PK04 289 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 C19orf48Q6RUI8 117 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 CLEC20AQ6ZU45 233 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 SYDE1Q6ZW31 735 aaPredicted RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 RASSF3Q86WH2 238 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 CPNE8Q86YQ8 564 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 SFTPA1Q8IWL2 248 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 HDDC3Q8N4P3 179 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 CHCHD4Q8N4Q1 142 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 EIF1ADQ8N9N8 165 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 TXNDC5Q8NBS9 432 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 HMGB4Q8WW32 186 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 IFT81Q8WYA0 676 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 MYLPFQ96A32 169 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 FAM149B1Q96BN6 582 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 PCED1BQ96HM7 432 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 TMEM74Q96NL1 305 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 TBCBQ99426 244 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 B3GNT5Q9BYG0 378 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 DMAP1Q9NPF5 467 aaPredicted RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.5□□□□□ -0.73
SS18-221ENST00000582448 AMACRQ9UHK6 382 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 ADAMTS6Q9UKP5 1117 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 TPX2Q9ULW0 747 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 MMP17Q9ULZ9 603 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 SNX11Q9Y5W9 270 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 FRYQ5TBA9 3013 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 EML5Q05BV3 1969 aa10.5□□□□□ -0.73
SS18-221ENST00000582448 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
SS18-221ENST00000582448 THADAQ6YHU6 1953 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 LEFTY2O00292 366 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 TULP2O00295 520 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 CLDN5O00501 218 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 DAB1O75553 588 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 TRUB2O95900 331 aaKnown RBP10.49□□□□□ -0.73
SS18-221ENST00000582448 HNRNPLP14866 589 aaKnown RBP eCLIP10.49□□□□□ -0.731e-9■■■■■ 30.1
SS18-221ENST00000582448 MIPP30301 263 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 FLT3P36888 993 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 COILP38432 576 aaPredicted RBP10.49□□□□□ -0.73
SS18-221ENST00000582448 PDK2Q15119 407 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 PPP1R7Q15435 360 aa10.49□□□□□ -0.73
SS18-221ENST00000582448 CYP1B1Q16678 543 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms