RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 IL10RBQ08334 325 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 GALNT2Q10471 571 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 CAMK2GQ13555 558 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 SNX1Q13596 522 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 RFTN1Q14699 578 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 ACCSLQ4AC99 568 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 INO80DQ53TQ3 878 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 C22orf39Q6P5X5 142 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 UNQ6494/PRO21346Q6UXR6 183 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 LINGO4Q6UY18 593 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 C4orf22Q6V702 233 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 DSG4Q86SJ6 1040 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 GSPT2Q8IYD1 628 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 PCDH20Q8N6Y1 951 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 ISG20Q96AZ6 181 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 MYO19Q96H55 970 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 TRIM31Q9BZY9 425 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 BRD8Q9H0E9 1235 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 UBA2Q9UBT2 640 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 SLCO3A1Q9UIG8 710 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 MFHAS1Q9Y4C4 1052 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 FREM2Q5SZK8 3169 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 ATRXP46100 2492 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 SHROOM3Q8TF72 1996 aa13.69□□□□□ -0.22
CSNK1D-220ENST00000581737 CNOT1A5YKK6 2376 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 LOC400499M0QZD8 3231 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 A0A1W2PQF6 199 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 TCRBV21S2A2A0A5A6 115 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 ANTXRLA6NF34 631 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 TTC34A8MYJ7 566 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 PPP1R12AO14974 1030 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 ALOX15BO15296 676 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 CST8O60676 142 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 RNASEH1O60930 286 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 MYBL2P10244 700 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 HLA-EP13747 358 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 ADCY8P40145 1251 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 GARSP41250 739 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 EIF3BP55884 814 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 DYNLT1P63172 113 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 FAM193AP78312 1265 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 GBE1Q04446 702 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 ZNF33AQ06730 810 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 ELAVL3Q14576 367 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 PDK1Q15118 436 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 DLG2Q15700 870 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 PLK5Q496M5 336 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 TTC27Q6P3X3 843 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 LRIG3Q6UXM1 1119 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 CDKL3Q8IVW4 592 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 PLD5Q8N7P1 536 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 OR2T3Q8NH03 318 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 P3H4Q92791 437 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 HHIPQ96QV1 700 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 PCDH9Q9HC56 1237 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 BCCIPQ9P287 314 aaKnown RBP eCLIP13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 HEY1Q9Y5J3 304 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 ZFYVE26Q68DK2 2539 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 DMXL2Q8TDJ6 3036 aa13.68□□□□□ -0.22
CSNK1D-220ENST00000581737 NBEAQ8NFP9 2946 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 CCDC163A0A0D9SF12 145 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 TCRBV7S2A1N4TA0A589 114 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 C4orf47A7E2U8 309 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 WASH3PC4AMC7 463 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 TMCC1O94876 653 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 MT-CO1P00395 513 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 KRT14P02533 472 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 KRT10P13645 584 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 PLTPP55058 493 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 SFSWAPQ12872 951 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 TMEM92Q6UXU6 159 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 Q6ZVU0 165 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 PLPP6Q8IY26 295 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 KDF1Q8NAX2 398 aaPredicted RBP13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 FRS2Q8WU20 508 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 ATG4AQ8WYN0 398 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 OR8D1Q8WZ84 308 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 FATE1Q969F0 183 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 HDAC11Q96DB2 347 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 ZC3H10Q96K80 434 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 TSGA13Q96PP4 275 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 DUSP15Q9H1R2 295 aaPredicted RBP13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 PDFQ9HBH1 243 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 FAM53CQ9NYF3 392 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 DTLQ9NZJ0 730 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 SEPT3Q9UH03 358 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 EBF1Q9UH73 591 aa13.67□□□□□ -0.22
CSNK1D-220ENST00000581737 J3KR12 359 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 K7ERQ8 282 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 MAFKO60675 156 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 SIN3BO75182 1162 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 SASH3O75995 380 aa13.66□□□□□ -0.22
CSNK1D-220ENST00000581737 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms