RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 OR6K2Q8NGY2 324 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 FAM71BQ8TC56 605 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CTNNBL1Q8WYA6 563 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 GATA6Q92908 595 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PSKH2Q96QS6 385 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SUV39H2Q9H5I1 410 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ATP13A3Q9H7F0 1226 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TOR4AQ9NXH8 423 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SEPT3Q9UH03 358 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 IPO11Q9UI26 975 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 BTBD3Q9Y2F9 522 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 IGF2RP11717 2491 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CACNA1BQ00975 2339 aa12.74□□□□□ -0.37
CDK5RAP3-222ENST00000581708 A0A1W2PQ67 120 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 J3KR12 359 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 LDOC1O95751 146 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PAK4O96013 591 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 XPAP23025 273 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 IL1R2P27930 398 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SERPINA4P29622 427 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 GKP32189 559 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 MAN1A1P33908 653 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 EIF4A3P38919 411 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ABL2P42684 1182 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 AP1S1P61966 158 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 YPEL5P62699 121 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 POLR2LP62875 67 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SLC25A11Q02978 314 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 AGERQ15109 404 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ST3GAL2Q16842 350 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ASTE1Q2TB18 679 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TMEM52BQ4KMG9 183 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 Q6ZSR6 202 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 KANSL1Q7Z3B3 1105 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SLCO6A1Q86UG4 719 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 VSTM4Q8IW00 320 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 BBS5Q8N3I7 341 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CHCHD4Q8N4Q1 142 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CXorf40AQ8TE69 158 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CELF6Q96J87 481 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CSPG4P5Q96PW8 444 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CINPQ9BW66 212 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 DEF6Q9H4E7 631 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SP110Q9HB58 689 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 DOCK9Q9BZ29 2069 aa12.73□□□□□ -0.37
CDK5RAP3-222ENST00000581708 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 NEMP2A6NFY4 417 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 IGLON5A6NGN9 336 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 DFFAO00273 331 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ENC1O14682 589 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TM7SF2O76062 418 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ATXN1LP0C7T5 689 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TMEM253P0C7T8 217 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TIMP2P16035 220 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 NFKBIAP25963 317 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CDH6P55285 790 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 HNRNPKP61978 463 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 IL9RQ01113 521 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ZNF211Q13398 564 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PTK2BQ14289 1009 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 FGL2Q14314 439 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PDK2Q15119 407 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 UGP2Q16851 508 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 HS1BP3Q53T59 392 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PRAMEF14Q5SWL7 426 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CFAP58Q5T655 872 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ERAP2Q6P179 960 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CCNI2Q6ZMN8 369 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TMPRSS7Q7RTY8 843 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SRLQ86TD4 932 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 GATAD2AQ86YP4 633 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CNGA4Q8IV77 575 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 NPWQ8N729 165 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 OR13H1Q8NG92 308 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ZNF564Q8TBZ8 553 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TSC1Q92574 1164 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 HSPH1Q92598 858 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 KLK6Q92876 244 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CENPTQ96BT3 561 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ECHDC3Q96DC8 303 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CNDP2Q96KP4 475 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 BMFQ96LC9 184 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TBATAQ96M53 351 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ABHD10Q9NUJ1 306 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 HAUS2Q9NVX0 235 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CTTNBP2NLQ9P2B4 639 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 CSNK1G3Q9Y6M4 447 aa12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 ANKRD11Q6UB99 2663 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SPTY2D1-AS1A0A0U1RR47 76 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 TMEM110-MUSTN1A8MSY1 372 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SPINT1O43278 529 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 AKR1B10O60218 316 aa12.71□□□□□ -0.37
CDK5RAP3-222ENST00000581708 SOCS5O75159 536 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms