RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ENPP7Q6UWV6 458 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 TFAP2DQ7Z6R9 452 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 SETD3Q86TU7 594 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 SFTPA2Q8IWL1 248 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 CACNA2D3Q8IZS8 1091 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 RYBPQ8N488 228 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 TP53I13Q8NBR0 393 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 RCBTB1Q8NDN9 531 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 OR6K2Q8NGY2 324 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 NT5C1BQ96P26 610 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 TAAR9Q96RI9 348 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 SPON2Q9BUD6 331 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 C1QTNF7Q9BXJ2 289 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 LRIT1Q9P2V4 623 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 FCF1Q9Y324 198 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 SNX10Q9Y5X0 201 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 FBN2P35556 2912 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 POLQO75417 2590 aa12.74□□□□□ -0.37
CSNK1D-218ENST00000581655 A1L4Q6 167 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 AREL1O15033 823 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 GRAP2O75791 330 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 KRT38O76015 456 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 TM7SF2O76062 418 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 FGF3P11487 239 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 PNLIPP16233 465 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 NR1D1P20393 614 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 MTA1Q13330 715 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 IRF4Q15306 451 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 KLHL40Q2TBA0 621 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 ZNF805Q5CZA5 627 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 RETSATQ6NUM9 610 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 TMEM110Q86TL2 294 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 PIM3Q86V86 326 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 SSC4DQ8WTU2 575 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 STK32AQ8WU08 396 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 ARHGEF26Q96DR7 871 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 SLC45A3Q96JT2 553 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 SLC2A13Q96QE2 648 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 HECAQ9UBI9 543 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 PCDHGA3Q9Y5H0 932 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 ACTL7AQ9Y615 435 aa12.73□□□□□ -0.37
CSNK1D-218ENST00000581655 DOCK4Q8N1I0 1966 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 HIVEP3Q5T1R4 2406 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 RAD1O60671 282 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 CPNE6O95741 557 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 RNF224P0DH78 156 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 GNLYP22749 145 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 PEX5P50542 639 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 ARF5P84085 180 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 SLC20A2Q08357 652 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 CDC20Q12834 499 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 AMZ1Q400G9 498 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 C14orf28Q4W4Y0 310 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 KCTD16Q68DU8 428 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 CAPRIN2Q6IMN6 1127 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 OGFOD3Q6PK18 319 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 ZNF683Q8IZ20 524 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 FAM46DQ8NEK8 389 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 CXorf40AQ8TE69 158 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 APOBEC4Q8WW27 367 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 KLHL32Q96NJ5 620 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 RBM15Q96T37 977 aaKnown RBP eCLIP12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 ANLNQ9NQW6 1124 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 B3GALT1Q9Y5Z6 326 aa12.72□□□□□ -0.37
CSNK1D-218ENST00000581655 A0A1B0GVL5 298 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 TMEM110-MUSTN1A8MSY1 372 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 B4DGG1 531 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 HGSO14964 777 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 CAPN5O15484 640 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 B4GAT1O43505 415 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 NUDT21O43809 227 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 VPS4BO75351 444 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 TNFP01375 233 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 UGT2B4P06133 528 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 GLI1P08151 1106 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 PFKFB1P16118 471 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 ITIH2P19823 946 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 HTR1BP28222 390 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 OAS2P29728 719 aaKnown RBP12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 OR1E1P30953 314 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 B4GALNT1Q00973 533 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 DPYDQ12882 1025 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 HLTFQ14527 1009 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 NFATC4Q14934 902 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 DEFB109BQ30KR1 87 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 RRAGAQ7L523 313 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 TAF8Q7Z7C8 310 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 TTC7BQ86TV6 843 aa12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 SMYD4Q8IYR2 804 aaPredicted RBP12.71□□□□□ -0.37
CSNK1D-218ENST00000581655 TEX19Q8NA77 164 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms