RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 AMBPP02760 352 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 ZNF883P0CG24 379 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 IGHV4-30-4P0DP06 118 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 ARSAP15289 507 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 FMO4P31512 558 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 TIMP3P35625 211 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 PNPLA4P41247 253 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 TRAPPC10P48553 1259 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 RPS6KA3P51812 740 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 ERVK11-1P61568 191 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 OS9Q13438 667 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 PRKG1Q13976 671 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 POSTNQ15063 836 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 ZNF484Q5JVG2 852 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 UNQ6126/PRO20091Q6UXV3 157 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 WDR5BQ86VZ2 330 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 CIARTQ8N365 385 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 GALNT15Q8N3T1 639 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 SCAIQ8N9R8 606 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 NEK9Q8TD19 979 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 KTI12Q96EK9 354 aaPredicted RBP3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 PAGR1Q9BTK6 254 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 NPFFR1Q9GZQ6 430 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 CHODLQ9H9P2 273 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 SAYSD1Q9NPB0 183 aa3.5□□□□□ -1.85
SMCHD1-206ENST00000581631 CACNA1FO60840 1977 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 TMEM247A6NEH6 219 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 C17orf100A8MU93 164 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 KDM4EB2RXH2 506 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 SEPT4O43236 478 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 TFRCP02786 760 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 FGF5P12034 268 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 PEX5P50542 639 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 ST3GAL1Q11201 340 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 FAM83BQ5T0W9 1011 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 TYW3Q6IPR3 259 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 LINS1Q8NG48 757 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 AFG1LQ8WV93 481 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 TRAPPC12Q8WVT3 735 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 THAP4Q8WY91 577 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 USP13Q92995 863 aaPredicted RBP3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 RILPL2Q969X0 211 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 RBM17Q96I25 401 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 LHPPQ9H008 270 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 ZNF696Q9H7X3 374 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 TLR8Q9NR97 1041 aaKnown RBP3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 RIPOR2Q9Y4F9 1068 aa3.49□□□□□ -1.85
SMCHD1-206ENST00000581631 hCG_1642624A0A1W2PR95 340 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 TARSL2A2RTX5 802 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 J3KR12 359 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 CBX6O95503 412 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 CKMT1AP12532 417 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 ADD2P35612 726 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 AARSP49588 968 aaKnown RBP eCLIP3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 ZNF132P52740 706 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 MVDP53602 400 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 PHEXP78562 749 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 ARHGAP8P85298 464 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 THOC5Q13769 683 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 BYSLQ13895 437 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 KRT72Q14CN4 511 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 PDCD2Q16342 344 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 AP5B1Q2VPB7 878 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 TMEM268Q5VZI3 342 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 AADACL2Q6P093 401 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 GDPD4Q6W3E5 623 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 ZNF441Q8N8Z8 693 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 KBTBD3Q8NAB2 608 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 RPS6KC1Q96S38 1066 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 FAM167BQ9BTA0 163 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 CXorf56Q9H5V9 222 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 KIF17Q9P2E2 1029 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 DHDHQ9UQ10 334 aa3.48□□□□□ -1.85
SMCHD1-206ENST00000581631 STX16-NPEPL1H3BU86 382 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 STX16O14662 325 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 STRNO43815 780 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 FAM155BO75949 473 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 METTL18O95568 372 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 CH25HO95992 272 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 LDHAP00338 332 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 CRYAAP02489 173 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 RXRAP19793 462 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 SSTR2P30874 369 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 RFC1P35251 1148 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 CDKN1AP38936 164 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 SKIV2L2P42285 1042 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 DPP6P42658 865 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 PTPN9P43378 593 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 MCM2P49736 904 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 BIRC2Q13490 618 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 IL13RA2Q14627 380 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 TAF5Q15542 800 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 TRMT1LQ7Z2T5 733 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 SUGP1Q8IWZ8 645 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 AADATQ8N5Z0 425 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 LRRC8CQ8TDW0 803 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 FBXO17Q96EF6 278 aa3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 TEFMQ96QE5 360 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 TRMT61BQ9BVS5 477 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-206ENST00000581631 CTDSP1Q9GZU7 261 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms