RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 UCKL1Q9NWZ5 548 aa21.2■□□□□ 0.98
CCDC42-203ENST00000581598 LHX6Q9UPM6 363 aa21.2■□□□□ 0.98
CCDC42-203ENST00000581598 DSPP15924 2871 aaKnown RBP21.19■□□□□ 0.98
CCDC42-203ENST00000581598 IGLON5A6NGN9 336 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 NEMP1O14524 444 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 SUOXP51687 545 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 RHOAP61586 193 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 HNRNPKP61978 463 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCDC42-203ENST00000581598 E2F1Q01094 437 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 FZD2Q14332 565 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 ATXN7L2Q5T6C5 722 aaPredicted RBP21.19■□□□□ 0.98
CCDC42-203ENST00000581598 FAM181AQ8N9Y4 354 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 SPC24Q8NBT2 197 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 HCAR2Q8TDS4 363 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 FNIP1Q8TF40 1166 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 LRRC19Q9H756 370 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 SCUBE2Q9NQ36 999 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 NLGN3Q9NZ94 848 aa21.19■□□□□ 0.98
CCDC42-203ENST00000581598 NEMP2A6NFY4 417 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 SCAMP1O15126 338 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 CSF2P04141 144 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 ALPPL2P10696 532 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 NDST2P52849 883 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 TPI1P60174 286 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 PFN3P60673 137 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 ZBED6P86452 979 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 CCDC173Q0VFZ6 552 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 COL9A2Q14055 689 aaPredicted RBP21.18■□□□□ 0.98
CCDC42-203ENST00000581598 ASIC2Q16515 512 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 PARGQ86W56 976 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 CENPTQ96BT3 561 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 NXPE2Q96DL1 559 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 DUSP23Q9BVJ7 150 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 NRSN2Q9GZP1 204 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 HAUS4Q9H6D7 363 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 PDFQ9HBH1 243 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 USP29Q9HBJ7 922 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 LHX3Q9UBR4 397 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 GGT7Q9UJ14 662 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 AP4E1Q9UPM8 1137 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 ITM2BQ9Y287 266 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 RAXQ9Y2V3 346 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 CSNK1G3Q9Y6M4 447 aa21.18■□□□□ 0.98
CCDC42-203ENST00000581598 TMEM191CA6NGB0 347 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 TOR1BO14657 336 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 RIOK3O14730 519 aaKnown RBP21.17■□□□□ 0.98
CCDC42-203ENST00000581598 CKMT1AP12532 417 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 NME1P15531 152 aaKnown RBP21.17■□□□□ 0.98
CCDC42-203ENST00000581598 PSMA2P25787 234 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 CASP14P31944 242 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 TARDBPQ13148 414 aaKnown RBP eCLIP21.17■□□□□ 0.98
CCDC42-203ENST00000581598 GRM3Q14832 879 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 CYTH1Q15438 398 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 ERMARDQ5T6L9 678 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 ZNF571Q7Z3V5 609 aaPredicted RBP21.17■□□□□ 0.98
CCDC42-203ENST00000581598 TTC7BQ86TV6 843 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 PSTKQ8IV42 348 aaKnown RBP21.17■□□□□ 0.98
CCDC42-203ENST00000581598 DNAJC28Q9NX36 388 aa21.17■□□□□ 0.98
CCDC42-203ENST00000581598 UBA2Q9UBT2 640 aaPredicted RBP21.17■□□□□ 0.98
CCDC42-203ENST00000581598 NBEAQ8NFP9 2946 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 TSPAN11A1L157 253 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 H3BM21 787 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 MFAP3LO75121 409 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 TPM1P09493 284 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 ZNF135P52742 658 aaPredicted RBP21.16■□□□□ 0.98
CCDC42-203ENST00000581598 DAB2P98082 770 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 INSM1Q01101 510 aaPredicted RBP21.16■□□□□ 0.98
CCDC42-203ENST00000581598 RTP5Q14D33 572 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 DNAAF5Q86Y56 855 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 ARFGAP1Q8N6T3 406 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 NCAPGQ9BPX3 1015 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 C1QTNF7Q9BXJ2 289 aa21.16■□□□□ 0.98
CCDC42-203ENST00000581598 LUC7L2Q9Y383 392 aaKnown RBP21.16■□□□□ 0.98
CCDC42-203ENST00000581598 A0A087WV48 116 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 TMCO5BA8MYB1 307 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 AKR1B15C9JRZ8 316 aaPredicted RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 EEF2KO00418 725 aaKnown RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 FFAR2O15552 330 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 ATMINO43313 823 aaPredicted RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 PRAMEF11O60813 436 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 TM7SF2O76062 418 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 RNF8O76064 485 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 FTLP02792 175 aaPredicted RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 GP1BAP07359 652 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 TIMP2P16035 220 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 CSNK1DP48730 415 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 CLDN6P56747 220 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 GSDMDP57764 484 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 YPEL5P62699 121 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 PDE1CQ14123 709 aaPredicted RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 TMEM52BQ4KMG9 183 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 AFMIDQ63HM1 303 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 E4F1Q66K89 784 aaPredicted RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 CNGA4Q8IV77 575 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 DCBLD1Q8N8Z6 715 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 TC2NQ8N9U0 490 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 ZNF548Q8NEK5 533 aaPredicted RBP21.15■□□□□ 0.98
CCDC42-203ENST00000581598 CXorf40AQ8TE69 158 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 CPLX3Q8WVH0 158 aa21.15■□□□□ 0.98
CCDC42-203ENST00000581598 TBATAQ96M53 351 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms