RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 UGT2B4P06133 528 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 TNFAIP3P21580 790 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 CYP4F3Q08477 520 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 TMEM52BQ4KMG9 183 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 ERMARDQ5T6L9 678 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 IGF2-ASQ6U949 168 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 LZTR1Q8N653 840 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 AOPEPQ8N6M6 819 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 TPCN2Q8NHX9 752 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 SNIP1Q8TAD8 396 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 KLHL32Q96NJ5 620 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 CALN1Q9BXU9 219 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 MRPL47Q9HD33 250 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 CLCA2Q9UQC9 943 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 CA5BQ9Y2D0 317 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 BZW2Q9Y6E2 419 aaKnown RBP14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 SCINQ9Y6U3 715 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 BAHCC1Q9P281 2608 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 ANKRD36A6QL64 1941 aa14.68□□□□□ -0.06
SMARCE1-216ENST00000580419 IGLON5A6NGN9 336 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 NEMP1O14524 444 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 TM7SF2O76062 418 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 RNF8O76064 485 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 DXOO77932 396 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 PCK1P35558 622 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 CLDN2P57739 230 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 TPI1P60174 286 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 RHOAP61586 193 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 INSM1Q01101 510 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 TARDBPQ13148 414 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 SCYL2Q6P3W7 929 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 LVRNQ6Q4G3 990 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 PTAR1Q7Z6K3 402 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 TTC7BQ86TV6 843 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 PYROXD2Q8N2H3 581 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 ZNF548Q8NEK5 533 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 WDR48Q8TAF3 677 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 SYN2Q92777 582 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 KLK6Q92876 244 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 HMCESQ96FZ2 354 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 MAGEB5Q9BZ81 275 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 FZD3Q9NPG1 666 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 SEPT11Q9NVA2 429 aaKnown RBP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 TMEM63CQ9P1W3 806 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 LHX3Q9UBR4 397 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 UBA2Q9UBT2 640 aaPredicted RBP14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 AP4E1Q9UPM8 1137 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 RAXQ9Y2V3 346 aa14.67□□□□□ -0.06
SMARCE1-216ENST00000580419 A0A1W2PQ67 120 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 ARHGAP42A6NI28 874 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 K7ESM1 405 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 RAD51BO15315 384 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 TEX33O43247 280 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 TIMP2P16035 220 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 BLKP51451 505 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 DAB2P98082 770 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 OGDHQ02218 1023 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 UGP2Q16851 508 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 ANO6Q4KMQ2 910 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 MACC1Q6ZN28 852 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 PHLDB2Q86SQ0 1253 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 LSMEM2Q8N112 164 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 RYBPQ8N488 228 aaPredicted RBP14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 ECHDC3Q96DC8 303 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 APOLD1Q96LR9 279 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 ZNF599Q96NL3 588 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 KLC2Q9H0B6 622 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 ISCUQ9H1K1 167 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 SUV39H2Q9H5I1 410 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 UCKL1Q9NWZ5 548 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 DNAJC28Q9NX36 388 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 SPASTQ9UBP0 616 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 ACTL7AQ9Y615 435 aa14.66□□□□□ -0.06
SMARCE1-216ENST00000580419 LY6G6EA0A0G2JKS1 128 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 A0A1W2PQJ5 194 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 EME2A4GXA9 379 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 FAM149AA5PLN7 773 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 LRRC53A6NM62 1247 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 LMO7DNF2Z398 122 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 AQP9O43315 295 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 CREB3O43889 395 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 OPA1O60313 960 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 SDC3O75056 442 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 HOXC4P09017 264 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 PSMA2P25787 234 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 HSPA9P38646 679 aaKnown RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 MLLT3P42568 568 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 ZNF165P49910 485 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 POLR2LP62875 67 aaKnown RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 PDE1CQ14123 709 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 NR1I3Q14994 352 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 CYTH1Q15438 398 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 BOLA3Q53S33 107 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 RALGPS1Q5JS13 557 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 ATXN7L2Q5T6C5 722 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 TP53I13Q8NBR0 393 aaPredicted RBP14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 CXorf40AQ8TE69 158 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 GLMNQ92990 594 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 BOCQ9BWV1 1114 aa14.65□□□□□ -0.06
SMARCE1-216ENST00000580419 KCTD5Q9NXV2 234 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms