RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SUV39H2Q9H5I1 410 aa15.02■□□□□ -0
SS18-212ENST00000579061 ETNK2Q9NVF9 386 aa15.02■□□□□ -0
SS18-212ENST00000579061 INTUQ9ULD6 942 aa15.02■□□□□ -0
SS18-212ENST00000579061 WASF3Q9UPY6 502 aa15.02■□□□□ -0
SS18-212ENST00000579061 TDRD6O60522 2096 aaKnown RBP15.01□□□□□ -0.01
SS18-212ENST00000579061 LRRK1Q38SD2 2015 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 NEMP1O14524 444 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 INSIG1O15503 277 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 SPINT1O43278 529 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 MTA2O94776 668 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 PAK4O96013 591 aaPredicted RBP15.01□□□□□ -0.01
SS18-212ENST00000579061 THEGLP0DJG4 465 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 TIMP2P16035 220 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 IL4RP24394 825 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 HSPA9P38646 679 aaKnown RBP15.01□□□□□ -0.01
SS18-212ENST00000579061 ARHGAP25P42331 645 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 SSR1P43307 286 aaKnown RBP15.01□□□□□ -0.01
SS18-212ENST00000579061 ELP6Q0PNE2 266 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 SGCGQ13326 291 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 FGL2Q14314 439 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 SHBQ15464 509 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 BRAT1Q6PJG6 821 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 ARHGAP36Q6ZRI8 547 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 SRLQ86TD4 932 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 MAP7D3Q8IWC1 876 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 RHOT2Q8IXI1 618 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 NETO2Q8NC67 525 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 TSEN2Q8NCE0 465 aaKnown RBP15.01□□□□□ -0.01
SS18-212ENST00000579061 SAP25Q8TEE9 199 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 EXOC2Q96KP1 924 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 PSKH2Q96QS6 385 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 CINPQ9BW66 212 aaPredicted RBP15.01□□□□□ -0.01
SS18-212ENST00000579061 SEPT3Q9UH03 358 aa15.01□□□□□ -0.01
SS18-212ENST00000579061 APOBEC2Q9Y235 224 aaKnown RBP15.01□□□□□ -0.01
SS18-212ENST00000579061 A6NNZ2 444 aa15□□□□□ -0.01
SS18-212ENST00000579061 EPHA8P29322 1005 aaPredicted RBP15□□□□□ -0.01
SS18-212ENST00000579061 AP1S1P61966 158 aa15□□□□□ -0.01
SS18-212ENST00000579061 FOXC1Q12948 553 aa15□□□□□ -0.01
SS18-212ENST00000579061 DPYSL3Q14195 570 aa15□□□□□ -0.01
SS18-212ENST00000579061 LBRQ14739 615 aaKnown RBP15□□□□□ -0.01
SS18-212ENST00000579061 TCEAL1Q15170 157 aa15□□□□□ -0.01
SS18-212ENST00000579061 TMEM52BQ4KMG9 183 aa15□□□□□ -0.01
SS18-212ENST00000579061 KYAT3Q6YP21 454 aaKnown RBP15□□□□□ -0.01
SS18-212ENST00000579061 GCNT7Q6ZNI0 430 aa15□□□□□ -0.01
SS18-212ENST00000579061 TP53INP2Q8IXH6 220 aa15□□□□□ -0.01
SS18-212ENST00000579061 TC2NQ8N9U0 490 aa15□□□□□ -0.01
SS18-212ENST00000579061 SLC35G2Q8TBE7 412 aa15□□□□□ -0.01
SS18-212ENST00000579061 RFFLQ8WZ73 363 aa15□□□□□ -0.01
SS18-212ENST00000579061 IFT43Q96FT9 208 aa15□□□□□ -0.01
SS18-212ENST00000579061 ZNF670Q9BS34 389 aa15□□□□□ -0.01
SS18-212ENST00000579061 ATP13A3Q9H7F0 1226 aa15□□□□□ -0.01
SS18-212ENST00000579061 GPR27Q9NS67 375 aa15□□□□□ -0.01
SS18-212ENST00000579061 SPTLC3Q9NUV7 552 aa15□□□□□ -0.01
SS18-212ENST00000579061 CA5BQ9Y2D0 317 aa15□□□□□ -0.01
SS18-212ENST00000579061 BTBD3Q9Y2F9 522 aa15□□□□□ -0.01
SS18-212ENST00000579061 IGLON5A6NGN9 336 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 TNFSF14O43557 240 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 BUB1BO60566 1050 aaPredicted RBP14.99□□□□□ -0.01
SS18-212ENST00000579061 MAFKO60675 156 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 PIGNO95427 931 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 PEX11BO96011 259 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 ITGAVP06756 1048 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 FTH1P19P0C7X4 201 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 XPAP23025 273 aaPredicted RBP14.99□□□□□ -0.01
SS18-212ENST00000579061 SERPINA4P29622 427 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 RGRP47804 291 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 TAS2R40P59535 323 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 MMRN1Q13201 1228 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 PAFAH1B3Q15102 231 aaKnown RBP14.99□□□□□ -0.01
SS18-212ENST00000579061 UGP2Q16851 508 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 PRAMEF14Q5SWL7 426 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 BBS5Q8N3I7 341 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 ATPAF2Q8N5M1 289 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 KCTD6Q8NC69 237 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 OR13H1Q8NG92 308 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 CXorf40AQ8TE69 158 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 NSMCE1Q8WV22 266 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 ADAMTS14Q8WXS8 1223 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 SPOCK2Q92563 424 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 FAF2Q96CS3 445 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 MRFAP1L1Q96HT8 127 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 BMFQ96LC9 184 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 KLF6Q99612 283 aaPredicted RBP14.99□□□□□ -0.01
SS18-212ENST00000579061 MYOCQ99972 504 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 FZD3Q9NPG1 666 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 KLHL11Q9NVR0 708 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 GGT7Q9UJ14 662 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 ITM2BQ9Y287 266 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 CHD8Q9HCK8 2581 aa14.99□□□□□ -0.01
SS18-212ENST00000579061 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.98□□□□□ -0.01
SS18-212ENST00000579061 A0A1W2PQ67 120 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CFAP69A5D8W1 941 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 ZNF487B1APH4 448 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 FPGTO14772 594 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 TM7SF2O76062 418 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 DKK1O94907 266 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CD48P09326 243 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CR2P20023 1033 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 RABIFP47224 123 aa14.98□□□□□ -0.01
SS18-212ENST00000579061 CLDN2P57739 230 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms