RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 TUBGCP5Q96RT8 1024 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 BAG1Q99933 345 aaPredicted RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 WRAP53Q9BUR4 548 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CPEB1Q9BZB8 566 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 EBF2Q9HAK2 575 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 IL21RQ9HBE5 538 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 NT5MQ9NPB1 228 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 FZD3Q9NPG1 666 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 SCUBE2Q9NQ36 999 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 DNAAF2Q9NVR5 837 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 DDX56Q9NY93 547 aaKnown RBP6.63□□□□□ -1.35
TRAF4-213ENST00000578917 LHX3Q9UBR4 397 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 NENFQ9UMX5 172 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 CA5BQ9Y2D0 317 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 HYOU1Q9Y4L1 999 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 HEY1Q9Y5J3 304 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 FADS3Q9Y5Q0 445 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 SLCO1B1Q9Y6L6 691 aa6.63□□□□□ -1.35
TRAF4-213ENST00000578917 KIAA1549LQ6ZVL6 1849 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 SPAARA0A1B0GVQ0 90 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 MED19A0JLT2 244 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 SOWAHDA6NJG2 315 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 GOLGA8CPA6NN73 597 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 A8MX80 341 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 RNF103O00237 685 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 APOL1O14791 398 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 TM4SF5O14894 197 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 WNT9AO14904 365 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 GIPC1O14908 333 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 AP1G1O43747 822 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 BUB1BO60566 1050 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 MAFKO60675 156 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 TM7SF2O76062 418 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ZRANB2O95218 330 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 NDUFA10O95299 355 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 MAP3K6O95382 1288 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 THEGLP0DJG4 465 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CD59P13987 128 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ZFXP17010 805 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 COMTP21964 271 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 HNRNPA2B1P22626 353 aaKnown RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 KDELR1P24390 212 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 IL4RP24394 825 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 HSPA9P38646 679 aaKnown RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CETN2P41208 172 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CTSKP43235 329 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CSNK1DP48730 415 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CCT8P50990 548 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 THOP1P52888 689 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 EPHB1P54762 984 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CLDN2P57739 230 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 NXPH1P58417 271 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 AP1S1P61966 158 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 DYNLT1P63172 113 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ELP6Q0PNE2 266 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 AP1B1Q10567 949 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 IFI16Q16666 785 aaKnown RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 UGP2Q16851 508 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 N4BP2L1Q5TBK1 243 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 LRRC38Q5VT99 294 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 KAZNQ674X7 775 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 TIGD7Q6NT04 549 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 BRAT1Q6PJG6 821 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 Q6ZSR6 202 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 PTAR1Q7Z6K3 402 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 IQCHQ86VS3 1027 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ZSCAN30Q86W11 494 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 DCP2Q8IU60 420 aaKnown RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 NAXDQ8IW45 347 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ARHGAP12Q8IWW6 846 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 TP53INP2Q8IXH6 220 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 NDUFAF2Q8N183 169 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 OXR1Q8N573 874 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 PCDH19Q8TAB3 1148 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 HCAR2Q8TDS4 363 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 RAPGEF5Q92565 580 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CAMK1GQ96NX5 476 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 RNF157Q96PX1 679 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 PSKH2Q96QS6 385 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ELF4Q99607 663 aaPredicted RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 CDC6Q99741 560 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF670Q9BS34 389 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 PDFQ9HBH1 243 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 NOD2Q9HC29 1040 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 PCDH12Q9NPG4 1184 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 RBM22Q9NW64 420 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 DNAJC28Q9NX36 388 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 SEPT10Q9P0V9 454 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 IMPACTQ9P2X3 320 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 DKK3Q9UBP4 350 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ITM2BQ9Y287 266 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 FNDC3AQ9Y2H6 1198 aaKnown RBP6.62□□□□□ -1.35
TRAF4-213ENST00000578917 PCDHGC4Q9Y5F7 938 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 ALG6Q9Y672 507 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 SPAG17Q6Q759 2223 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 FANCMQ8IYD8 2048 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 THADAQ6YHU6 1953 aa6.62□□□□□ -1.35
TRAF4-213ENST00000578917 A6NNZ2 444 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms