RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 BST2Q10589 180 aaKnown RBP11.21□□□□□ -0.61
GGA3-206ENST00000578773 SPECC1LQ69YQ0 1117 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 PMF1Q6P1K2 205 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 STXBP4Q6ZWJ1 553 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 KDELC2Q7Z4H8 507 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 ZNF438Q7Z4V0 828 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 FAM186BQ8IYM0 893 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 FAM46DQ8NEK8 389 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 OR6C4Q8NGE1 309 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 OR6K2Q8NGY2 324 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 PATE1Q8WXA2 126 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 OR1E3Q8WZA6 343 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 RNF34Q969K3 372 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 SRRTQ9BXP5 876 aaKnown RBP11.21□□□□□ -0.61
GGA3-206ENST00000578773 BACH2Q9BYV9 841 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 INTS2Q9H0H0 1204 aaKnown RBP11.21□□□□□ -0.61
GGA3-206ENST00000578773 AKAP7Q9P0M2 348 aaPredicted RBP11.21□□□□□ -0.61
GGA3-206ENST00000578773 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
GGA3-206ENST00000578773 OR1A2Q9Y585 309 aa11.21□□□□□ -0.61
GGA3-206ENST00000578773 MYO7BQ6PIF6 2116 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 TCAF2A6NFQ2 919 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 F5H5T6 163 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 STK17BO94768 372 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 RASGRP1O95267 797 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 DLGAP3O95886 979 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 SNRPB2P08579 225 aaKnown RBP11.2□□□□□ -0.62
GGA3-206ENST00000578773 THRAP10827 490 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 ZNF28P17035 718 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
GGA3-206ENST00000578773 MAP4P27816 1152 aaKnown RBP11.2□□□□□ -0.62
GGA3-206ENST00000578773 COPB1P53618 953 aaKnown RBP11.2□□□□□ -0.62
GGA3-206ENST00000578773 KRTAP10-9P60411 292 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 SRP54P61011 504 aaKnown RBP11.2□□□□□ -0.62
GGA3-206ENST00000578773 EDRF1Q3B7T1 1238 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 DCAF12Q5T6F0 453 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 JMJD6Q6NYC1 403 aaPredicted RBP11.2□□□□□ -0.62
GGA3-206ENST00000578773 FBXL22Q6P050 247 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 AGBL5Q8NDL9 886 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 HAPLN3Q96S86 360 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 RBM15Q96T37 977 aaKnown RBP eCLIP11.2□□□□□ -0.62
GGA3-206ENST00000578773 MIS12Q9H081 205 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 SLC39A2Q9NP94 309 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 CNGB3Q9NQW8 809 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 ASF1BQ9NVP2 202 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 DMAC2Q9NW81 257 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 POLHQ9Y253 713 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 RPS6KL1Q9Y6S9 549 aa11.2□□□□□ -0.62
GGA3-206ENST00000578773 ACANP16112 2415 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 A0A0D9SEW6 157 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 A8MU76 341 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 PRSS44E7EML9 344 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 ZG16O60844 167 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 DLSTP36957 453 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 YPEL5P62699 121 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 MC1RQ01726 317 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 KLHL40Q2TBA0 621 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 CRTC2Q53ET0 693 aaPredicted RBP11.19□□□□□ -0.62
GGA3-206ENST00000578773 ZNF517Q6ZMY9 492 aaPredicted RBP11.19□□□□□ -0.62
GGA3-206ENST00000578773 TAF8Q7Z7C8 310 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 SCML4Q8N228 414 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 ASB12Q8WXK4 309 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 KCTD13Q8WZ19 329 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 TFAP2BQ92481 460 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 SERPINB11Q96P15 392 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 RUFY1Q96T51 708 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 ZSWIM1Q9BR11 485 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 WRAP53Q9BUR4 548 aaKnown RBP11.19□□□□□ -0.62
GGA3-206ENST00000578773 SLC29A3Q9BZD2 475 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 TMEM168Q9H0V1 697 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 ZDHHC6Q9H6R6 413 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 SPATS2LQ9NUQ6 558 aaKnown RBP11.19□□□□□ -0.62
GGA3-206ENST00000578773 CROTQ9UKG9 612 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 VANGL2Q9ULK5 521 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 TMEM184BQ9Y519 407 aaPredicted RBP11.19□□□□□ -0.62
GGA3-206ENST00000578773 SNX10Q9Y5X0 201 aa11.19□□□□□ -0.62
GGA3-206ENST00000578773 C16orf96A6NNT2 1141 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 B4E171 279 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 O00370 1275 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 NUDT21O43809 227 aaKnown RBP11.18□□□□□ -0.62
GGA3-206ENST00000578773 EIF5BO60841 1220 aaKnown RBP11.18□□□□□ -0.62
GGA3-206ENST00000578773 BMP6P22004 513 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 CSTF2P33240 577 aaKnown RBP eCLIP11.18□□□□□ -0.62
GGA3-206ENST00000578773 TSPAN7P41732 249 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 LEPRP48357 1165 aaKnown RBP11.18□□□□□ -0.62
GGA3-206ENST00000578773 CCNHP51946 323 aaPredicted RBP11.18□□□□□ -0.62
GGA3-206ENST00000578773 PGDP52209 483 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 NUCB2P80303 420 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 NFATC4Q14934 902 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 ZRANB3Q5FWF4 1079 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 SNAP47Q5SQN1 464 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 CEP135Q66GS9 1140 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 SLC6A19Q695T7 634 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 SPNS3Q6ZMD2 512 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 ZNF761Q86XN6 746 aaPredicted RBP11.18□□□□□ -0.62
GGA3-206ENST00000578773 RBMXL3Q8N7X1 1067 aaKnown RBP11.18□□□□□ -0.62
GGA3-206ENST00000578773 SNRNP40Q96DI7 357 aaKnown RBP11.18□□□□□ -0.62
GGA3-206ENST00000578773 PPP1R16AQ96I34 528 aa11.18□□□□□ -0.62
GGA3-206ENST00000578773 ASPSCR1Q9BZE9 553 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms