RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 IMP4Q96G21 291 aaKnown RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 UBE2OQ9C0C9 1292 aaKnown RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 ZYG11BQ9C0D3 744 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 SLC25A51Q9H1U9 297 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 SUDS3Q9H7L9 328 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 ABT1Q9ULW3 272 aaKnown RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 FNDC1Q4ZHG4 1894 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 SMNDC1O75940 238 aaKnown RBP eCLIP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 LUC7L3O95232 432 aaKnown RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 RPLP2P05387 115 aaKnown RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 HTR7P34969 479 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 PBX3P40426 434 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 AP2B1P63010 937 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 TBL3Q12788 808 aaKnown RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 PTPRCAPQ14761 206 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 LRRC36Q1X8D7 754 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 CTXN3Q4LDR2 81 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 FAM171A1Q5VUB5 890 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 TRAF7Q6Q0C0 670 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 RNF111Q6ZNA4 994 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 PGBD5Q8N414 524 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 TXNDC5Q8NBS9 432 aaKnown RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 RDH11Q8TC12 318 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 ACTRT2Q8TDY3 377 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 CATSPER2Q96P56 530 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 FAM193BQ96PV7 902 aaPredicted RBP17.72■□□□□ 0.43
ERBB2-205ENST00000578199 GPR62Q9BZJ7 368 aa17.72■□□□□ 0.43
ERBB2-205ENST00000578199 DOCK4Q8N1I0 1966 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 ARHGEF37A1IGU5 675 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 MAP3K7O43318 606 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 H2AFYO75367 372 aaKnown RBP17.71■□□□□ 0.43
ERBB2-205ENST00000578199 CPB1P15086 417 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 PAMP19021 973 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 KCNA5P22460 613 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 RENBPP51606 427 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 PLK1P53350 603 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 SLC12A2P55011 1212 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 CCNIQ14094 377 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 HNRNPDQ14103 355 aaKnown RBP17.71■□□□□ 0.43
ERBB2-205ENST00000578199 KIAA0930Q6ICG6 404 aaPredicted RBP17.71■□□□□ 0.43
ERBB2-205ENST00000578199 PGM2L1Q6PCE3 622 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 UMODL1-AS1Q8N2C9 162 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 PPFIBP2Q8ND30 876 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 OR13J1Q8NGT2 312 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 FAM136AQ96C01 138 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 SP110Q9HB58 689 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 VWA8A3KMH1 1905 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 NT5C1B-RDH14C9J2C7 533 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 PIK3R1P27986 724 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 SERPINH1P50454 418 aaKnown RBP17.71■□□□□ 0.43
ERBB2-205ENST00000578199 ARSDP51689 593 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 RSPO2Q6UXX9 243 aaPredicted RBP17.71■□□□□ 0.43
ERBB2-205ENST00000578199 SNX32Q86XE0 403 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 PCSK9Q8NBP7 692 aaKnown RBP17.71■□□□□ 0.43
ERBB2-205ENST00000578199 FBXO32Q969P5 355 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 FBXO44Q9H4M3 255 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 POMKQ9H5K3 350 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 MID2Q9UJV3 735 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 ANGPTL2Q9UKU9 493 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 POMPQ9Y244 141 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 PCDHB5Q9Y5E4 795 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 ACTL7AQ9Y615 435 aa17.71■□□□□ 0.43
ERBB2-205ENST00000578199 MKI67P46013 3256 aaKnown RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 CCDC189A1A4V9 331 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 WASH4PA8MWX3 477 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 EOMESO95936 686 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 RHOQP17081 205 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 MSX2P35548 267 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 ACVRL1P37023 503 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 TM4SF4P48230 202 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 TAF10Q12962 218 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 PRKAA1Q13131 559 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 C10orf120Q5SQS8 335 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 LMNTD2Q8IXW0 634 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 OR6P1Q8NGX9 317 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 SEPT5Q99719 369 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 IGSF5Q9NSI5 407 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 NDE1Q9NXR1 346 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 UXTQ9UBK9 157 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 ARHGAP26Q9UNA1 814 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 LAMA3Q16787 3333 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 INPPL1O15357 1258 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 CCNT2O60583 730 aaKnown RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 COL6A2P12110 1019 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 PAX7P23759 505 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 CRABP2P29373 138 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 NUDT2P50583 147 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 MSLNQ13421 630 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 MGAT5BQ3V5L5 792 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 CFAP52Q8N1V2 620 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 PTCD2Q8WV60 388 aaKnown RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 ANKRD49Q8WVL7 239 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 C8orf48Q96LL4 319 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 RPRD1AQ96P16 312 aaPredicted RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 MRPL46Q9H2W6 279 aaKnown RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 MRM3Q9HC36 420 aaKnown RBP17.7■□□□□ 0.42
ERBB2-205ENST00000578199 S100A14Q9HCY8 104 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 TNFRSF12AQ9NP84 129 aa17.7■□□□□ 0.42
ERBB2-205ENST00000578199 TMEM248Q9NWD8 314 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms