RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TTC7BQ86TV6 843 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 TXLNBQ8N3L3 684 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 NSMCE1Q8WV22 266 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 HDAC11Q96DB2 347 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 SLC6A18Q96N87 628 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 MGME1Q9BQP7 344 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 MAK16Q9BXY0 300 aaKnown RBP19.54■□□□□ 0.72
SS18-208ENST00000577751 GRPEL1Q9HAV7 217 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 TRPM6Q9BX84 2022 aa19.54■□□□□ 0.72
SS18-208ENST00000577751 A0A0U1RQJ8 604 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 A0A1W2PR77 199 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 APOL1O14791 398 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 VILLO15195 856 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 TSPAN6O43657 245 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 GJB3O75712 270 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 PCDH8O95206 1070 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 ZRANB2O95218 330 aaKnown RBP eCLIP19.53■□□□□ 0.72
SS18-208ENST00000577751 ZFXP17010 805 aaPredicted RBP19.53■□□□□ 0.72
SS18-208ENST00000577751 MX2P20592 715 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 MAPK8P45983 427 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 MARCKSL1P49006 195 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 SCNN1BP51168 640 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 SUOXP51687 545 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 AP1S1P61966 158 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 KIF5AQ12840 1032 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 ZNF235Q14590 738 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 TEAD4Q15561 434 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 SETMARQ53H47 684 aaPredicted RBP19.53■□□□□ 0.72
SS18-208ENST00000577751 NAPEPLDQ6IQ20 393 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 KIAA1161Q6NSJ0 714 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 SPOCD1Q6ZMY3 1216 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 ZSCAN30Q86W11 494 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 BBS5Q8N3I7 341 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 LRRC57Q8N9N7 239 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 KIAA1524Q8TCG1 905 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.53■□□□□ 0.72
SS18-208ENST00000577751 KRT35Q92764 455 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 ECHDC3Q96DC8 303 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 FEM1CQ96JP0 617 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 SERAC1Q96JX3 654 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 NUDCD1Q96RS6 583 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 ATP13A3Q9H7F0 1226 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 DNAAF2Q9NVR5 837 aaKnown RBP19.53■□□□□ 0.72
SS18-208ENST00000577751 PCDHA3Q9Y5H8 950 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 ADGRG1Q9Y653 693 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 SPTBN4Q9H254 2564 aa19.53■□□□□ 0.72
SS18-208ENST00000577751 TP53BP1Q12888 1972 aaPredicted RBP19.52■□□□□ 0.72
SS18-208ENST00000577751 A0A1B0GVT2 93 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 GRID2IPA4D2P6 1211 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 TRAFD1O14545 582 aaPredicted RBP19.52■□□□□ 0.72
SS18-208ENST00000577751 WNT1P04628 370 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 CD38P28907 300 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 SERPINA4P29622 427 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 CTNNA1P35221 906 aaKnown RBP19.52■□□□□ 0.72
SS18-208ENST00000577751 MMP13P45452 471 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 ATXN3P54252 364 aaPredicted RBP19.52■□□□□ 0.72
SS18-208ENST00000577751 NAP1L1P55209 391 aaKnown RBP19.52■□□□□ 0.72
SS18-208ENST00000577751 RPS21P63220 83 aaKnown RBP19.52■□□□□ 0.72
SS18-208ENST00000577751 UGP2Q16851 508 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 RALGPS1Q5JS13 557 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 BRAT1Q6PJG6 821 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 CAMK1DQ8IU85 385 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 LRRC8AQ8IWT6 810 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 RCOR2Q8IZ40 523 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 MINDY1Q8N5J2 469 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 CCDC112Q8NEF3 446 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 EXD1Q8NHP7 514 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 GTPBP2Q9BX10 602 aaKnown RBP19.52■□□□□ 0.72
SS18-208ENST00000577751 TRIM10Q9UDY6 481 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 AMACRQ9UHK6 382 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 ANKRD6Q9Y2G4 727 aa19.52■□□□□ 0.72
SS18-208ENST00000577751 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.52■□□□□ 0.72
SS18-208ENST00000577751 TMEM131Q92545 1883 aa19.52■□□□□ 0.71
SS18-208ENST00000577751 PRAMEF26H0Y7S4 382 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 ARHGAP6O43182 974 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 PEX5P50542 639 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 BCL2L1Q07817 233 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 PPIDQ08752 370 aaKnown RBP19.51■□□□□ 0.71
SS18-208ENST00000577751 FGL2Q14314 439 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 KIF19Q2TAC6 998 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 TFDP3Q5H9I0 405 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 SEL1L3Q68CR1 1132 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 IL27RAQ6UWB1 636 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 LAYNQ6UX15 382 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 ZSWIM9Q86XI8 627 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 RFX6Q8HWS3 928 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 MFSD2AQ8NA29 543 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 TMEM145Q8NBT3 493 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 OR2I1PQ8NGU4 316 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 SPOCK2Q92563 424 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 OLFM3Q96PB7 478 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 C1QTNF2Q9BXJ5 285 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 GGT7Q9UJ14 662 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 ITM2BQ9Y287 266 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 HEY1Q9Y5J3 304 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 SNX11Q9Y5W9 270 aa19.51■□□□□ 0.71
SS18-208ENST00000577751 ASCC3Q8N3C0 2202 aaKnown RBP19.5■□□□□ 0.71
SS18-208ENST00000577751 hCG_1818297A0A087WSY0 165 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.5■□□□□ 0.71
SS18-208ENST00000577751 TTC24A2A3L6 582 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms