RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TFR2Q9UP52 801 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 CA5BQ9Y2D0 317 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 EFCAB6Q5THR3 1501 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 POLRMTO00411 1230 aaKnown RBP8.92□□□□□ -0.98
CDH8-203ENST00000577390 NCAM2O15394 837 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 PHKG2P15735 406 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 GPD2P43304 727 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 NT5C2P49902 561 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 ARFIP1P53367 373 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 CHRNB3Q05901 458 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 TEAD4Q15561 434 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 ATG14Q6ZNE5 492 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 EFCAB3Q8N7B9 438 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 OR10Q1Q8NGQ4 319 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 CXorf40AQ8TE69 158 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 RELTQ969Z4 430 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 EBF3Q9H4W6 596 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 AGO2Q9UKV8 859 aaKnown RBP8.92□□□□□ -0.98
CDH8-203ENST00000577390 BAZ2AQ9UIF9 1905 aaKnown RBP8.92□□□□□ -0.98
CDH8-203ENST00000577390 FMN2Q9NZ56 1722 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 ANKDD1BA6NHY2 528 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 SLC2A3P11169 496 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 VBP1P61758 197 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 PM20D2Q8IYS1 436 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 DLG3Q92796 817 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.92□□□□□ -0.98
CDH8-203ENST00000577390 IRF2BPLQ9H1B7 796 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 WNT8AQ9H1J5 351 aa8.92□□□□□ -0.98
CDH8-203ENST00000577390 ECM29Q5VYK3 1845 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 PLEKP08567 350 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 PTENP60484 403 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDH8-203ENST00000577390 ZC3H7AQ8IWR0 971 aaKnown RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 POU5F2Q8N7G0 328 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 ACTR8Q9H981 624 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 CUEDC1Q9NWM3 386 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 ZNF16P17020 682 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 EPORP19235 508 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 AQP4P55087 323 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 ITGA1P56199 1179 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 MAPK14Q16539 360 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 PRR5LQ6MZQ0 368 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 AAGABQ6PD74 315 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 UBE2R2Q712K3 238 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 CLNKQ7Z7G1 428 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 TDRD5Q8NAT2 981 aaKnown RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 ARMC5Q96C12 935 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 GSDMCQ9BYG8 508 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 GNG13Q9P2W3 67 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 MRTO4Q9UKD2 239 aaKnown RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 SAMD4AQ9UPU9 718 aaKnown RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 NPHP3-ACAD11A0A0J9YXS1 232 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 LOC100653049A0A140TA62 436 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 URADA6NGE7 173 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 CHRNGP07510 517 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 FDX1P10109 184 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 GNALP38405 381 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 GPC5P78333 572 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 AMIGO2Q86SJ2 522 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 C4orf33Q8N1A6 199 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 DHRSXQ8N5I4 330 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 HIF1ANQ9NWT6 349 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 SNX7Q9UNH6 387 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 CDK16Q00536 496 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 TAP1Q03518 808 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 TOP3AQ13472 1001 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 MYLK3Q32MK0 819 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 ATP6AP1LQ52LC2 224 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 AGAP9Q5VTM2 703 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 NOTUMQ6P988 496 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 SRBD1Q8N5C6 995 aaKnown RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 CIDECQ96AQ7 238 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 PTERQ96BW5 349 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 HIPK3Q9H422 1215 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 TNRQ92752 1358 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 RHOCP08134 193 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 GNAZP19086 355 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 TUBP50607 506 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 ZNF746Q6NUN9 644 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 GALNT18Q6P9A2 607 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 RASGRP3Q8IV61 690 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 ARMC10Q8N2F6 343 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 TTC29Q8NA56 475 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 ZSCAN4Q8NAM6 433 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 C18orf8Q96DM3 657 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 RNF31Q96EP0 1072 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 RIBC2Q9H4K1 309 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 KLK14Q9P0G3 267 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 HPSEQ9Y251 543 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 SUPT7LO94864 414 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 CAMK2DQ13557 499 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 MRNIPQ6NTE8 343 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 DET1Q7L5Y6 550 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 ZNF317Q96PQ6 595 aaPredicted RBP8.91□□□□□ -0.98
CDH8-203ENST00000577390 CNPY3Q9BT09 278 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 LMAN2LQ9H0V9 348 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 AP4B1Q9Y6B7 739 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 PNPLA7Q6ZV29 1317 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 TRAPPC6AO75865 159 aa8.91□□□□□ -0.98
CDH8-203ENST00000577390 GNSP15586 552 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms