RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 KAT6AQ92794 2004 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 IDO1P14902 403 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 HOXA10P31260 410 aaPredicted RBP13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 SERPINH1P50454 418 aaKnown RBP13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZNF135P52742 658 aaPredicted RBP13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 ANKRD23Q86SG2 305 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 PHTF2Q8N3S3 785 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 UTP4Q969X6 686 aaKnown RBP13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 NXNL1Q96CM4 212 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 ACTR8Q9H981 624 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 TNFSF13BQ9Y275 285 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZNF536O15090 1300 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 SEC22BO75396 215 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 KCNH1O95259 989 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 AMHP03971 560 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A6P19224 532 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A1P22309 533 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A4P22310 534 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC7A1P30825 629 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A3P35503 534 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A5P35504 534 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 C1DQ13901 141 aaKnown RBP13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 GRM3Q14832 879 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 SPDYE7PQ495Y7 208 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 CCNYL2Q5T2Q4 361 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 ARMCX6Q7L4S7 300 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 FAM83AQ86UY5 434 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 MRIQ9BWK5 157 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 ULBP1Q9BZM6 244 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZNF358Q9NW07 568 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 CRLS1Q9UJA2 301 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 TEX264Q9Y6I9 313 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 PLIN4Q96Q06 1357 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC22A2O15244 555 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 NCF4Q15080 339 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 TMEM198Q66K66 360 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 SCIMPQ6UWF3 145 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 KRT73Q86Y46 540 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 RBM12BQ8IXT5 1001 aaKnown RBP13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 MCRS1Q96EZ8 462 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 DKK3Q9UBP4 350 aa13.21□□□□□ -0.29
PCDHGB3-201ENST00000576222 MT-ND1P03886 318 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 CFHP08603 1231 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 IVDP26440 423 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 HARS2P49590 506 aaKnown RBP13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 PSMD5Q16401 504 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 CARTPTQ16568 116 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 RFX4Q33E94 735 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 TIGD2Q4W5G0 525 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 EEF1DP3Q658K8 133 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 MILR1Q7Z6M3 343 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 PROSER1Q86XN7 944 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 HOMEZQ8IX15 550 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 MFSD3Q96ES6 412 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 TEKT5Q96M29 485 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 QKIQ96PU8 341 aaKnown RBP eCLIP13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 TMCC3Q9ULS5 477 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM50BQ9Y247 325 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 AP3M1Q9Y2T2 418 aa13.21□□□□□ -0.3
PCDHGB3-201ENST00000576222 KRT6AP02538 564 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 KRT6BP04259 564 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 LINC00032P0C843 101 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 MAGP20916 626 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 RRM2P31350 389 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 SOAT1P35610 550 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 KRT6CP48668 564 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 KLF1Q13351 362 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PPM1LQ5SGD2 360 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PPP1R26Q5T8A7 1209 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 ZNF605Q86T29 641 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 OR52K2Q8NGK3 314 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 RAB2BQ8WUD1 216 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 OR52B2Q96RD2 323 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 B3GNT5Q9BYG0 378 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 CLPBQ9H078 707 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 ELOVL6Q9H5J4 265 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 REEP1Q9H902 201 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 CHRAC1Q9NRG0 131 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 SPASTQ9UBP0 616 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 IPO13O94829 963 aaKnown RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 CAPN1P07384 714 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 CHRNGP07510 517 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 IL1R2P27930 398 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 BNIP3Q12983 259 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TP53BP2Q13625 1128 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 SIX1Q15475 284 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 C10orf120Q5SQS8 335 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 TTC23LQ6PF05 361 aa13.2□□□□□ -0.3
PCDHGB3-201ENST00000576222 PIGZQ86VD9 579 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms