RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 KLHDC7BQ96G42 594 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 C1QTNF7Q9BXJ2 289 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 SLC17A9Q9BYT1 436 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 CPEB1Q9BZB8 566 aaKnown RBP15.43■□□□□ 0.06
SMG6-220ENST00000576218 SUV39H2Q9H5I1 410 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 SCUBE2Q9NQ36 999 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 CA5BQ9Y2D0 317 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 PCDHA13Q9Y5I0 950 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 PLXNA2O75051 1894 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 SPTBN2O15020 2390 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 SOWAHDA6NJG2 315 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 UPK3BL1B0FP48 263 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 UPK3BL2E5RIL1 263 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 WNT9AO14904 365 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 GIPC1O14908 333 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 FLRT2O43155 660 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 SH3BP5O60239 455 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 WNT1P04628 370 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 ZNF883P0CG24 379 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 THEGLP0DJG4 465 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 MMP13P45452 471 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 AP1S1P61966 158 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 SIM1P81133 766 aaPredicted RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 SLC10A7Q0GE19 358 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 OVGP1Q12889 678 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 MARC1Q5VT66 337 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 NCBP2-AS2Q69YL0 99 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 TIGD7Q6NT04 549 aaPredicted RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 BRAT1Q6PJG6 821 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 IQCHQ86VS3 1027 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 RFX6Q8HWS3 928 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 CAMK1DQ8IU85 385 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 LRRC49Q8IUZ0 686 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 OXR1Q8N573 874 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 CCNYQ8ND76 341 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 PDCD6IPQ8WUM4 868 aaKnown RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 ZNF641Q96N77 438 aaPredicted RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 ELF4Q99607 663 aaPredicted RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 WRAP53Q9BUR4 548 aaKnown RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 DDX56Q9NY93 547 aaKnown RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 DKK3Q9UBP4 350 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 GGT7Q9UJ14 662 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 ZFR2Q9UPR6 939 aaKnown RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 HYOU1Q9Y4L1 999 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 CNOT1A5YKK6 2376 aaKnown RBP15.42■□□□□ 0.06
SMG6-220ENST00000576218 CACNA1AO00555 2505 aa15.42■□□□□ 0.06
SMG6-220ENST00000576218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.41■□□□□ 0.06
SMG6-220ENST00000576218 A0A1W2PR77 199 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 IGLON5A6NGN9 336 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 A6NNZ2 444 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 FPGTO14772 594 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 YKT6O15498 198 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 GJB3O75712 270 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 NDUFA10O95299 355 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 MAP3K6O95382 1288 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 PAK4O96013 591 aaPredicted RBP15.41■□□□□ 0.06
SMG6-220ENST00000576218 ITGAVP06756 1048 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 ADRB1P08588 477 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 CD59P13987 128 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 MX2P20592 715 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 COMTP21964 271 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 KDELR1P24390 212 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 NFKBIAP25963 317 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 RGRP47804 291 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 CSNK1DP48730 415 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 SUOXP51687 545 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 NXPH1P58417 271 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 FAM193AP78312 1265 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 ZNF423Q2M1K9 1284 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 TMEM259Q4ZIN3 620 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 PRAMEF14Q5SWL7 426 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 N4BP2L1Q5TBK1 243 aaPredicted RBP15.41■□□□□ 0.06
SMG6-220ENST00000576218 KIAA1328Q86T90 577 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 PCDH19Q8TAB3 1148 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 RHBDD1Q8TEB9 315 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 RAPGEF5Q92565 580 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 PSKH2Q96QS6 385 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 BAG1Q99933 345 aaPredicted RBP15.41■□□□□ 0.06
SMG6-220ENST00000576218 PCDHGB2Q9Y5G2 931 aa15.41■□□□□ 0.06
SMG6-220ENST00000576218 ASCC3Q8N3C0 2202 aaKnown RBP15.41■□□□□ 0.06
SMG6-220ENST00000576218 DCHS1Q96JQ0 3298 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 SPAARA0A1B0GVQ0 90 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 APOL1O14791 398 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 MAFKO60675 156 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 MMP20O60882 483 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 TM7SF2O76062 418 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 ZFXP17010 805 aaPredicted RBP15.4■□□□□ 0.06
SMG6-220ENST00000576218 IL4RP24394 825 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 GARSP41250 739 aaKnown RBP15.4■□□□□ 0.06
SMG6-220ENST00000576218 GRK6P43250 576 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 ARSEP51690 589 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 CLDN2P57739 230 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 MAXP61244 160 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 POLR2LP62875 67 aaKnown RBP15.4■□□□□ 0.06
SMG6-220ENST00000576218 DYNLT1P63172 113 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 NSUN2Q08J23 767 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMG6-220ENST00000576218 PAFAH1B3Q15102 231 aaKnown RBP15.4■□□□□ 0.06
SMG6-220ENST00000576218 IFI16Q16666 785 aaKnown RBP15.4■□□□□ 0.06
SMG6-220ENST00000576218 UGP2Q16851 508 aa15.4■□□□□ 0.06
SMG6-220ENST00000576218 PIP4P1Q86T03 277 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms