RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 KDELR1P24390 212 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 ABL2P42684 1182 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 C21orf59P57076 290 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 BNC1Q01954 994 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 SLC10A7Q0GE19 358 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 ZNF235Q14590 738 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 RFTN1Q14699 578 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-216ENST00000575599 LBRQ14739 615 aaKnown RBP13.42□□□□□ -0.26
RPAIN-216ENST00000575599 TCEAL1Q15170 157 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 KIF19Q2TAC6 998 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 SETMARQ53H47 684 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-216ENST00000575599 ODF2Q5BJF6 829 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 SEL1L3Q68CR1 1132 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 NAPEPLDQ6IQ20 393 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 HORMAD1Q86X24 394 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 NSMCE1Q8WV22 266 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 VOPP1Q96AW1 172 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 GOLPH3Q9H4A6 298 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 GAREM1Q9H706 876 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 IL21RQ9HBE5 538 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 SEPT3Q9UH03 358 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 ITM2BQ9Y287 266 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 ANKRD6Q9Y2G4 727 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 FADS3Q9Y5Q0 445 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 SNX11Q9Y5W9 270 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 SPTBN4Q9H254 2564 aa13.42□□□□□ -0.26
RPAIN-216ENST00000575599 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 MACROD2A1Z1Q3 448 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 MUSKO15146 869 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 SLC31A1O15431 190 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 BUB1BO60566 1050 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-216ENST00000575599 MAFKO60675 156 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 GJB3O75712 270 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 CER1O95813 267 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 CD38P28907 300 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 SLC1A1P43005 524 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 HLA-BQ31612 363 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 PPM1JQ5JR12 505 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 CFAP58Q5T655 872 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 NEK5Q6P3R8 708 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 IL27RAQ6UWB1 636 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 ZNF662Q6ZS27 426 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 REXO1L1PQ8IX06 675 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 RHOT1Q8IXI2 618 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 PAF1Q8N7H5 531 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-216ENST00000575599 FAF2Q96CS3 445 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 CALR3Q96L12 384 aaKnown RBP13.41□□□□□ -0.26
RPAIN-216ENST00000575599 ZNF599Q96NL3 588 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 ALS2CR12Q96Q35 445 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 FZD3Q9NPG1 666 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 GGT7Q9UJ14 662 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 ZFR2Q9UPR6 939 aaKnown RBP13.41□□□□□ -0.26
RPAIN-216ENST00000575599 CA5BQ9Y2D0 317 aa13.41□□□□□ -0.26
RPAIN-216ENST00000575599 CACNA1EQ15878 2313 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 TP53BP1Q12888 1972 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 DOCK9Q9BZ29 2069 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 A0A0A6YYK5 440 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 TTC24A2A3L6 582 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 RCCD1A6NED2 376 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 USP27XA6NNY8 438 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 BTNL10A8MVZ5 291 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 TM4SF5O14894 197 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 WNT1P04628 370 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 XPAP23025 273 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 NUDT1P36639 197 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 SCNN1BP51168 640 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 GBE1Q04446 702 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 GRM3Q14832 879 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 PAFAH1B3Q15102 231 aaKnown RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 ZNF284Q2VY69 593 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 SLC45A4Q5BKX6 768 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 KIAA1161Q6NSJ0 714 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 ERMP1Q7Z2K6 904 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 SRLQ86TD4 932 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 TTC7BQ86TV6 843 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 CAMK1DQ8IU85 385 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 BBS5Q8N3I7 341 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 RNF10Q8N5U6 811 aaKnown RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 TMEM131Q92545 1883 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 RAB7BQ96AH8 199 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 LACRTQ9GZZ8 138 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 DNAAF2Q9NVR5 837 aaKnown RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 DMTF1Q9Y222 760 aa13.4□□□□□ -0.26
RPAIN-216ENST00000575599 FNDC3AQ9Y2H6 1198 aaKnown RBP13.4□□□□□ -0.26
RPAIN-216ENST00000575599 PRAMEF26H0Y7S4 382 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 KCNK3O14649 394 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 VILLO15195 856 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 SPINT1O43278 529 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 AP1G1O43747 822 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 PEX11BO96011 259 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 SERPINA4P29622 427 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 GARSP41250 739 aaKnown RBP13.39□□□□□ -0.27
RPAIN-216ENST00000575599 MMP13P45452 471 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms