RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 MAGI2Q86UL8 1455 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 RHPN2Q8IUC4 686 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 CNTN4Q8IWV2 1026 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 RNF168Q8IYW5 571 aaPredicted RBP5.1□□□□□ -1.59
TSR1-203ENST00000575049 CADM4Q8NFZ8 388 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 CEP76Q8TAP6 659 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 CORO2AQ92828 525 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 ZBTB45Q96K62 511 aaPredicted RBP5.1□□□□□ -1.59
TSR1-203ENST00000575049 PHACTR3Q96KR7 559 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 C1orf74Q96LT6 269 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 SRSF8Q9BRL6 282 aaKnown RBP5.1□□□□□ -1.59
TSR1-203ENST00000575049 CRACR2AQ9BSW2 395 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 MRPL1Q9BYD6 325 aaKnown RBP5.1□□□□□ -1.59
TSR1-203ENST00000575049 PANK2Q9BZ23 570 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 CLPBQ9H078 707 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 HSD3B7Q9H2F3 369 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 SERHL2Q9H4I8 314 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 NRDE2Q9H7Z3 1164 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 PDS5BQ9NTI5 1447 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 ZBTB40Q9NUA8 1239 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 DKK3Q9UBP4 350 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 RAB21Q9UL25 225 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 TRPC5Q9UL62 973 aaPredicted RBP5.1□□□□□ -1.59
TSR1-203ENST00000575049 MKLN1Q9UL63 735 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 HPCAL4Q9UM19 191 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 SORCS3Q9UPU3 1222 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 MRPS17Q9Y2R5 130 aaKnown RBP5.1□□□□□ -1.59
TSR1-203ENST00000575049 NCOA3Q9Y6Q9 1424 aa5.1□□□□□ -1.59
TSR1-203ENST00000575049 ARHGEF5Q12774 1597 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 PLA2R1Q13018 1463 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 RTEL1-TNFRSF6BF6WH68 1400 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 RNF103-CHMP3A0A140T963 221 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 TCRBV21S2A2A0A5A6 115 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 RNF103O00237 685 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 LEFTY2O00292 366 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 TRIM24O15164 1050 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 PAGE4O60829 102 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 FAM20BO75063 409 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 TADA2AO75478 443 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 BCAR3O75815 825 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 REC8O95072 547 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 INHBAP08476 426 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ATXN1LP0C7T5 689 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 TSPY4P0CV99 314 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 TSPY10P0CW01 314 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 PEPDP12955 493 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ERCC2P18074 760 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 KRT4P19013 534 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 CCNA2P20248 432 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 CASTP20810 708 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 RBL1P28749 1068 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 PBLDP30039 288 aaPredicted RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 APOBEC3AP31941 199 aaPredicted RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 HSPA4P34932 840 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 TNNT2P45379 298 aaPredicted RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 LUMP51884 338 aaPredicted RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 PGDP52209 483 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 RAP2BP61225 183 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 RPL15P61313 204 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 EFNB1P98172 346 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 SLC25A3Q00325 362 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 IFT88Q13099 833 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 FRG1Q14331 258 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 IL11RAQ14626 422 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ACOX1Q15067 660 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 HFEQ30201 348 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 DPCR1Q3MIW9 517 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 CEP55Q53EZ4 464 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ZNF667Q5HYK9 610 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ANKRD40Q6AI12 368 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 CRIP3Q6Q6R5 217 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 MTHFD1LQ6UB35 978 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 KIAA1324Q6UXG2 1013 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 CLEC9AQ6UXN8 241 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 CLEC17AQ6ZS10 378 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 RRM2BQ7LG56 351 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 SYT12Q8IV01 421 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 SPARTQ8N0X7 666 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 MINDY1Q8N5J2 469 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 RTL3Q8N8U3 475 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 XXYLT1Q8NBI6 393 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 PDPRQ8NCN5 879 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 DENND6BQ8NEG7 585 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 NEK9Q8TD19 979 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 NOC3LQ8WTT2 800 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 LRIG1Q96JA1 1093 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 NLRP4Q96MN2 994 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 SLC25A23Q9BV35 468 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 MLPHQ9BV36 600 aaPredicted RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 STRA6Q9BX79 667 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ZNF341Q9BYN7 854 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 NT5C3AQ9H0P0 336 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 DNAJC18Q9H819 358 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 GBA2Q9HCG7 927 aaPredicted RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 FBRSL1Q9HCM7 1045 aaKnown RBP5.09□□□□□ -1.59
TSR1-203ENST00000575049 THAP1Q9NVV9 213 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 ETAA1Q9NY74 926 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 EXTL2Q9UBQ6 330 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 AMACRQ9UHK6 382 aa5.09□□□□□ -1.59
TSR1-203ENST00000575049 APPL1Q9UKG1 709 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms