RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 TRAF2Q12933 501 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 GRM3Q14832 879 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 ZSWIM9Q86XI8 627 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 SLC41A1Q8IVJ1 513 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 COG1Q8WTW3 980 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 C1orf54Q8WWF1 131 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 MS4A14Q96JA4 679 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 HSPA12BQ96MM6 686 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 OSBPL9Q96SU4 736 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 SMARCAL1Q9NZC9 954 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 KLHL8Q9P2G9 620 aaPredicted RBP16.43■□□□□ 0.22
PFN1-203ENST00000574872 DNPEPQ9ULA0 475 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 GON4LQ3T8J9 2241 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 SPAG17Q6Q759 2223 aa16.43■□□□□ 0.22
PFN1-203ENST00000574872 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.42■□□□□ 0.22
PFN1-203ENST00000574872 LRRC72A6NJI9 287 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 SLC7A4O43246 635 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 PLRG1O43660 514 aaKnown RBP16.42■□□□□ 0.22
PFN1-203ENST00000574872 RHOBTB1O94844 696 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 FSBPO95073 299 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 PRKCGP05129 697 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
PFN1-203ENST00000574872 CD86P42081 329 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 TAS2R38P59533 333 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 SNX1Q13596 522 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 IHHQ14623 411 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 TEX44Q53QW1 395 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 ALG1LQ6GMV1 187 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 ZNF567Q8N184 647 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 SUMF1Q8NBK3 374 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 ARRDC2Q8TBH0 407 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 SNX19Q92543 992 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 FAM131CQ96AQ9 280 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 ZC3H10Q96K80 434 aaKnown RBP16.42■□□□□ 0.22
PFN1-203ENST00000574872 PBKQ96KB5 322 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 ZNF641Q96N77 438 aaPredicted RBP16.42■□□□□ 0.22
PFN1-203ENST00000574872 NAPGQ99747 312 aaPredicted RBP16.42■□□□□ 0.22
PFN1-203ENST00000574872 AMACRQ9UHK6 382 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 GGT7Q9UJ14 662 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 SNX12Q9UMY4 172 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 ITM2BQ9Y287 266 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 THADAQ6YHU6 1953 aa16.42■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3DA0A087WVF3 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3IA0A087WXS9 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3EA0A087X179 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3KA0A087X1G2 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 BCLAF3A2AJT9 711 aaKnown RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3FA6NER0 549 aaPredicted RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 MEI4A8MW99 385 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3LB9A6J9 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TRAFD1O14545 582 aaPredicted RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 ZNF185O15231 689 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 MTSS1O43312 755 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3HP0C7X1 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TIMP2P16035 220 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 ITIH2P19823 946 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 NFKB1P19838 968 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 CD68P34810 354 aaPredicted RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 PPP2CBP62714 309 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 PPP2CAP67775 309 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 SEMG2Q02383 582 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 CCDC15Q0P6D6 951 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 SIX1Q15475 284 aaPredicted RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 RALGPS1Q5JS13 557 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 LYSMD4Q5XG99 296 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3GQ6DHY5 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3CQ6IPX1 549 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 PID1Q7Z2X4 250 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TTC7BQ86TV6 843 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TBC1D3Q8IZP1 549 aaPredicted RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 FAM71DQ8N9W8 422 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 OR2T34Q8NGX1 318 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 SLC35B2Q8TB61 432 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 NKD2Q969F2 451 aaPredicted RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 TEKT5Q96M29 485 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 RBM15Q96T37 977 aaKnown RBP eCLIP16.41■□□□□ 0.22
PFN1-203ENST00000574872 FERMT1Q9BQL6 677 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 GLOD4Q9HC38 313 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 DKK3Q9UBP4 350 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 RAI2Q9Y5P3 530 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 ATXN2Q99700 1313 aaKnown RBP16.41■□□□□ 0.22
PFN1-203ENST00000574872 ANKRD36A6QL64 1941 aa16.41■□□□□ 0.22
PFN1-203ENST00000574872 TSPAN11A1L157 253 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 CTAGE9A4FU28 777 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 UPK3BL1B0FP48 263 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 UPK3BL2E5RIL1 263 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 NEMP1O14524 444 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 FANCGO15287 622 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 SPINT1O43278 529 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 LIASO43766 372 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 SOCS5O75159 536 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 PCDH8O95206 1070 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 LMNAP02545 664 aaKnown RBP16.4■□□□□ 0.22
PFN1-203ENST00000574872 MMP2P08253 660 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 SERPINF2P08697 491 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 ITPKAP23677 461 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 MAOBP27338 520 aa16.4■□□□□ 0.22
PFN1-203ENST00000574872 MAT2AP31153 395 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms