RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 CAMK1GQ96NX5 476 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 MCEEQ96PE7 176 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 CNPY3Q9BT09 278 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 LRRC1Q9BTT6 524 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 HDAC8Q9BY41 377 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 MAGEH1Q9H213 219 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 NDFIP2Q9NV92 336 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
LITAF-216ENST00000574848 PCDHA3Q9Y5H8 950 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 WASF2Q9Y6W5 498 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 A0A1B0GTQ1 180 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 WASH4PA8MWX3 477 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 H0Y8X5 98 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 CBX4O00257 560 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 PLK4O00444 970 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 YKT6O15498 198 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 HTR7P34969 479 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 ACVRL1P37023 503 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 GRK6P43250 576 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 GEMIN4P57678 1058 aaKnown RBP10.76□□□□□ -0.69
LITAF-216ENST00000574848 NXPH1P58417 271 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 OGDHQ02218 1023 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 OVGP1Q12889 678 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 MAMLD1Q13495 774 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 PIGHQ14442 188 aaPredicted RBP10.76□□□□□ -0.69
LITAF-216ENST00000574848 EFHC2Q5JST6 749 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 EMBQ6PCB8 327 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 DCUN1D2Q6PH85 259 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 DPY19L3Q6ZPD9 716 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 ADAT2Q7Z6V5 191 aaKnown RBP10.76□□□□□ -0.69
LITAF-216ENST00000574848 RHOT1Q8IXI2 618 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 RTL3Q8N8U3 475 aaKnown RBP10.76□□□□□ -0.69
LITAF-216ENST00000574848 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 CHST14Q8NCH0 376 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 FNIP1Q8TF40 1166 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 ADAMTS14Q8WXS8 1223 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 GATA6Q92908 595 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 VOPP1Q96AW1 172 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 ARRDC3Q96B67 414 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 SKA1Q96BD8 255 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 PPP1R16AQ96I34 528 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 SERAC1Q96JX3 654 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 KRT12Q99456 494 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 ELF4Q99607 663 aaPredicted RBP10.76□□□□□ -0.69
LITAF-216ENST00000574848 CDC6Q99741 560 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 SCNM1Q9BWG6 230 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 RAB17Q9H0T7 212 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 ERVMER34-1Q9H9K5 563 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 IL36AQ9UHA7 158 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 FZD10Q9ULW2 581 aa10.76□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3DA0A087WVF3 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3IA0A087WXS9 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3EA0A087X179 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3KA0A087X1G2 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3FA6NER0 549 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 ZSCAN5CA6NGD5 496 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3LB9A6J9 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 RNF103O00237 685 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 KPNA3O00505 521 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 WNT9AO14904 365 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 RAMP2O60895 175 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 RNGTTO60942 597 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 HEXIM1O94992 359 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 TOP3BO95985 862 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 GSRP00390 522 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 PROS1P07225 676 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3HP0C7X1 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 FTH1P19P0C7X4 201 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 ITGB7P26010 798 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 RECQLP46063 649 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 CCNHP51946 323 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 C21orf59P57076 290 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 CUL1Q13616 776 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 DHX34Q14147 1143 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 SUZ12Q15022 739 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 SHBQ15464 509 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 INAVAQ3KP66 663 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 SETMARQ53H47 684 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 ODF2Q5BJF6 829 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 SLC45A4Q5BKX6 768 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 BEND6Q5SZJ8 279 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3GQ6DHY5 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3CQ6IPX1 549 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 RWDD4Q6NW29 188 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 UNQ6494/PRO21346Q6UXR6 183 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 CCNI2Q6ZMN8 369 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 ERN2Q76MJ5 926 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 PRPF39Q86UA1 669 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 KLHL7Q8IXQ5 586 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TBC1D3Q8IZP1 549 aaPredicted RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 OXR1Q8N573 874 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 MFSD2AQ8NA29 543 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 CASKIN2Q8WXE0 1202 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 LRIG1Q96JA1 1093 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 SPON2Q9BUD6 331 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 MAGEB5Q9BZ81 275 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 TNKS2Q9H2K2 1166 aa10.75□□□□□ -0.69
LITAF-216ENST00000574848 NOL6Q9H6R4 1146 aaKnown RBP10.75□□□□□ -0.69
LITAF-216ENST00000574848 VIPAS39Q9H9C1 493 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms