RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 ADRB3P13945 408 aa33.46■■■□□ 2.95
CTDNEP1-209ENST00000574205 WASHC5Q12768 1159 aa33.46■■■□□ 2.95
CTDNEP1-209ENST00000574205 NSMCE3Q96MG7 304 aa33.46■■■□□ 2.95
CTDNEP1-209ENST00000574205 AGAP3Q96P47 875 aa33.46■■■□□ 2.95
CTDNEP1-209ENST00000574205 LRRC72A6NJI9 287 aa33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 FGGP02679 453 aa33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 RBL1P28749 1068 aa33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 CFAP58Q5T655 872 aa33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 DARS2Q6PI48 645 aaKnown RBP33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 C17orf53Q8N3J3 647 aaPredicted RBP33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 NKD2Q969F2 451 aaPredicted RBP33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 TEKT5Q96M29 485 aa33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 FRMD8P1Q9BZ68 369 aaPredicted RBP33.45■■■□□ 2.95
CTDNEP1-209ENST00000574205 BCLAF3A2AJT9 711 aaKnown RBP33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 SOCS5O75159 536 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 DSC2Q02487 901 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 LPAL2Q16609 132 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 BRAT1Q6PJG6 821 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 ADAT2Q7Z6V5 191 aaKnown RBP33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 OR2T34Q8NGX1 318 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 ARRDC2Q8TBH0 407 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 MAIP1Q8WWC4 291 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 FOXJ1Q92949 421 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 RAB7BQ96AH8 199 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 ECHDC3Q96DC8 303 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 TRIM44Q96DX7 344 aaPredicted RBP33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 WDR24Q96S15 920 aa33.44■■■□□ 2.94
CTDNEP1-209ENST00000574205 TSPAN11A1L157 253 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 TRAFD1O14545 582 aaPredicted RBP33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 LMNAP02545 664 aaKnown RBP33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 TAS2R38P59533 333 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 SLC35B2Q8TB61 432 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 OSBPL9Q96SU4 736 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 C10orf88Q9H8K7 445 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 SNX12Q9UMY4 172 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 FAM47DPA6NHR8 397 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 LAIR1Q6GTX8 287 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 LOXL4Q96JB6 756 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 C6orf106Q9H6K1 298 aaPredicted RBP33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 PCDHGC4Q9Y5F7 938 aa33.43■■■□□ 2.94
CTDNEP1-209ENST00000574205 GON4LQ3T8J9 2241 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 HTRA2O43464 458 aaPredicted RBP33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 SERPINF2P08697 491 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 TTC7BQ86TV6 843 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 SLC41A1Q8IVJ1 513 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 RASGEF1CQ8N431 466 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 DEFB119Q8N690 84 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 SPOCK2Q92563 424 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 HSPA12BQ96MM6 686 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 PHOX2BQ99453 314 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 PREBQ9HCU5 417 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 KLHL8Q9P2G9 620 aaPredicted RBP33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 TRHDEQ9UKU6 1024 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 DNPEPQ9ULA0 475 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 ZKSCAN5Q9Y2L8 839 aa33.42■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3DA0A087WVF3 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3IA0A087WXS9 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3EA0A087X179 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3KA0A087X1G2 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 A0A1W2PQ67 120 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3FA6NER0 549 aaPredicted RBP33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 METTL12A8MUP2 240 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3LB9A6J9 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3HP0C7X1 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 PTGER3P43115 390 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 DHPSP49366 369 aaPredicted RBP33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 NIPAL4Q0D2K0 466 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 LONRF2Q1L5Z9 754 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3GQ6DHY5 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3CQ6IPX1 549 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 TBC1D3Q8IZP1 549 aaPredicted RBP33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 ATG4AQ8WYN0 398 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 GPR179Q6PRD1 2367 aa33.41■■■□□ 2.94
CTDNEP1-209ENST00000574205 CES2O00748 559 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 KCNN4O15554 427 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 AP1G1O43747 822 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 ABL2P42684 1182 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 SUOXP51687 545 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 POLR2LP62875 67 aaKnown RBP33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 SIX1Q15475 284 aaPredicted RBP33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 UGP2Q16851 508 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 FAM182AQ5T1J6 154 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 ZNF567Q8N184 647 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 PAF1Q8N7H5 531 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 NAPGQ99747 312 aaPredicted RBP33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 SLC25A51Q9H1U9 297 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 USP29Q9HBJ7 922 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 GLOD4Q9HC38 313 aa33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 TTC7AQ9ULT0 858 aaPredicted RBP33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 TNRC6BQ9UPQ9 1833 aaKnown RBP33.4■■■□□ 2.94
CTDNEP1-209ENST00000574205 LIASO43766 372 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 STK10O94804 968 aaKnown RBP33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 TIMP2P16035 220 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 TRAF2Q12933 501 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 LYSMD4Q5XG99 296 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 KIAA0895LQ68EN5 471 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 NEK5Q6P3R8 708 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 ARMCX6Q7L4S7 300 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 PID1Q7Z2X4 250 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms