RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PTGER3P43115 390 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 CCR5P51681 352 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 IFI35P80217 286 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 PIP5KL1Q5T9C9 394 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 KIAA0895LQ68EN5 471 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 NCEH1Q6PIU2 408 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 ASCL5Q7RTU5 278 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 TTC7BQ86TV6 843 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 SLC41A1Q8IVJ1 513 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 DEFB119Q8N690 84 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 CEP76Q8TAP6 659 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 PIGKQ92643 395 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 CARD9Q9H257 536 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 C6orf106Q9H6K1 298 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 SEPT10Q9P0V9 454 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 DMDP11532 3685 aa12.91□□□□□ -0.34
TRAPPC1-206ENST00000573989 PRR5-ARHGAP8B1AHC4 643 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 H7C0C1 242 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 KCNK1O00180 336 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 PLK4O00444 970 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 TSPAN6O43657 245 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 AP1G1O43747 822 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 PCDH8O95206 1070 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 PIGNO95427 931 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 JCHAINP01591 159 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 PECAM1P16284 738 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 ITPKAP23677 461 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 ATP5OP48047 213 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 METAP1P53582 386 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 ELP6Q0PNE2 266 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZNF211Q13398 564 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 ERAP2Q6P179 960 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 PARS2Q7L3T8 475 aaKnown RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 PRPF39Q86UA1 669 aaKnown RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 NDUFAF2Q8N183 169 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 VAT1Q99536 393 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 IL12RB2Q99665 862 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 SEMA3CQ99985 751 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 SAE1Q9UBE0 346 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 RIF1Q5UIP0 2472 aaKnown RBP12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 OTOGLQ3ZCN5 2332 aa12.9□□□□□ -0.34
TRAPPC1-206ENST00000573989 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 USP34Q70CQ2 3546 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZFHX2Q9C0A1 2572 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 KCNK3O14649 394 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 MUSKO15146 869 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 SERPINF2P08697 491 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZNF806P0C7X5 589 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 CR2P20023 1033 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 CD27P26842 260 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 RGRP47804 291 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 MAXP61244 160 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 OTUD4Q01804 1114 aaKnown RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 ADCY2Q08462 1091 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 PRKD1Q15139 912 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 NOMO1Q15155 1222 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 DUOXA1Q1HG43 343 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 SETMARQ53H47 684 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 SLC45A4Q5BKX6 768 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 ALG1LQ6GMV1 187 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 KIAA1161Q6NSJ0 714 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 TRIM69Q86WT6 500 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 CAMK1DQ8IU85 385 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 CDKL3Q8IVW4 592 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 REXO1L1PQ8IX06 675 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 PGBD5Q8N414 524 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 ACTL9Q8TC94 416 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 MAIP1Q8WWC4 291 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 SKA1Q96BD8 255 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 QKIQ96PU8 341 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 NUSAP1Q9BXS6 441 aaKnown RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 MIR1-1HGQ9H1L0 117 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 TRMT1Q9NXH9 659 aaKnown RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 EIF2B4Q9UI10 523 aaKnown RBP12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 PILRBQ9UKJ0 227 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
TRAPPC1-206ENST00000573989 A0A1B0GTW7 788 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 A0A1W2PPC4 97 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 TSPAN11A1L157 253 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 UPK3BL1B0FP48 263 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 UPK3BL2E5RIL1 263 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 KHNYNO15037 678 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 RNGTTO60942 597 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 HLA-DQB2P05538 268 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 RBP3P10745 1247 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 EIF3EP60228 445 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 RPS21P63220 83 aaKnown RBP12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 SPEM2Q0P670 501 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 CSRP2Q16527 193 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 UGP2Q16851 508 aa12.88□□□□□ -0.35
TRAPPC1-206ENST00000573989 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms