RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 PMS2P1A4D2B8 440 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 MMP20O60882 483 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 RFC1P35251 1148 aaPredicted RBP22.27■■□□□ 1.16
SNF8-216ENST00000573795 SOX5P35711 763 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 POLR2FP61218 127 aaKnown RBP22.27■■□□□ 1.16
SNF8-216ENST00000573795 C1orf61Q13536 156 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 C3orf38Q5JPI3 329 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 VPS36Q86VN1 386 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 PHACTR4Q8IZ21 702 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 ARHGEF26Q96DR7 871 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 ATXN7L3BQ96GX2 97 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 VCPIP1Q96JH7 1222 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 CLPBQ9H078 707 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 VPS16Q9H269 839 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 NLRC4Q9NPP4 1024 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 NCKIPSDQ9NZQ3 722 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 SPASTQ9UBP0 616 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 HPCAL4Q9UM19 191 aa22.27■■□□□ 1.16
SNF8-216ENST00000573795 PDX1P52945 283 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 SKOR1P84550 965 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 NR0B2Q15466 257 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 PRRT3Q5FWE3 981 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 CDKAL1Q5VV42 579 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 RTL3Q8N8U3 475 aaKnown RBP22.26■■□□□ 1.15
SNF8-216ENST00000573795 BTN2A2Q8WVV5 523 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 KCNE4Q8WWG9 221 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 TBATAQ96M53 351 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 GDAP1L1Q96MZ0 367 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 IL12RB2Q99665 862 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 TTYH3Q9C0H2 523 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 NUP62CLQ9H1M0 184 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 FAM207AQ9NSI2 230 aaPredicted RBP22.26■■□□□ 1.15
SNF8-216ENST00000573795 SSUH2Q9Y2M2 353 aa22.26■■□□□ 1.15
SNF8-216ENST00000573795 ZSCAN5CA6NGD5 496 aaPredicted RBP22.25■■□□□ 1.15
SNF8-216ENST00000573795 LMO7DNF2Z398 122 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 RIOK3O14730 519 aaKnown RBP22.25■■□□□ 1.15
SNF8-216ENST00000573795 MUSKO15146 869 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 INSIG1O15503 277 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 BUB1O43683 1085 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 CELA2BP08218 269 aaPredicted RBP22.25■■□□□ 1.15
SNF8-216ENST00000573795 KRT3P12035 628 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 TIMP2P16035 220 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 THOP1P52888 689 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 ADKP55263 362 aaKnown RBP22.25■■□□□ 1.15
SNF8-216ENST00000573795 TMPRSS3P57727 454 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 YPEL5P62699 121 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 PTK2BQ14289 1009 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 KRT31Q15323 416 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 C6orf132Q5T0Z8 1188 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 WDR59Q6PJI9 974 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 TRIM72Q6ZMU5 477 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 MACC1Q6ZN28 852 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 TTC7BQ86TV6 843 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 EPAS1Q99814 870 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 THSD1Q9NS62 852 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 LHX3Q9UBR4 397 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 SIK3Q9Y2K2 1263 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 MFHAS1Q9Y4C4 1052 aa22.25■■□□□ 1.15
SNF8-216ENST00000573795 FLNBO75369 2602 aaKnown RBP22.25■■□□□ 1.15
SNF8-216ENST00000573795 TCRBV5S1A1TA0A578 114 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 ERVH48-1M5A8F1 160 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 TM7SF2O76062 418 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 TSHRP16473 764 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 GPD1P21695 349 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 IRF4Q15306 451 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 CLEC16AQ2KHT3 1053 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 KLHL40Q2TBA0 621 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 INO80DQ53TQ3 878 aaPredicted RBP22.24■■□□□ 1.15
SNF8-216ENST00000573795 CT47A1Q5JQC4 288 aaPredicted RBP22.24■■□□□ 1.15
SNF8-216ENST00000573795 RBM44Q6ZP01 1051 aaKnown RBP22.24■■□□□ 1.15
SNF8-216ENST00000573795 NYAP1Q6ZVC0 841 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 PHF13Q86YI8 300 aaPredicted RBP22.24■■□□□ 1.15
SNF8-216ENST00000573795 ENOX1Q8TC92 643 aaKnown RBP22.24■■□□□ 1.15
SNF8-216ENST00000573795 CXorf40AQ8TE69 158 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 HMCESQ96FZ2 354 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 SLC46A1Q96NT5 459 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 WRAP53Q9BUR4 548 aaKnown RBP22.24■■□□□ 1.15
SNF8-216ENST00000573795 ADAM22Q9P0K1 906 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 DKK3Q9UBP4 350 aa22.24■■□□□ 1.15
SNF8-216ENST00000573795 YY2O15391 372 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 KLK10O43240 276 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 CCP110O43303 1012 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 TCEA3O75764 348 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 IGSF6O95976 241 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 PLA2G2AP14555 144 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 EIF4A3P38919 411 aaKnown RBP22.23■■□□□ 1.15
SNF8-216ENST00000573795 UCNP55089 124 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 RHOAP61586 193 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 ARHGAP40Q5TG30 622 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 BROXQ5VW32 411 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 SLFN11Q7Z7L1 901 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 C3orf20Q8ND61 904 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 TPCN2Q8NHX9 752 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 CASKIN2Q8WXE0 1202 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 GRAMD1AQ96CP6 724 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 EXOC2Q96KP1 924 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 DPH1Q9BZG8 443 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 CHMP5Q9NZZ3 219 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 COQ6Q9Y2Z9 468 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 PCDHGA8Q9Y5G5 932 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms