RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CAAP1Q9H8G2 361 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 CWC15Q9P013 229 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 MFHAS1Q9Y4C4 1052 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 CHD8Q9HCK8 2581 aa12.85□□□□□ -0.35
NPLOC4-213ENST00000573519 ACACBO00763 2458 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 ASPMQ8IZT6 3477 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 AREL1O15033 823 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 SPINT1O43278 529 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 TM7SF2O76062 418 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 TIMP2P16035 220 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 DGKAP23743 735 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 IL1R2P27930 398 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 ACADVLP49748 655 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 ZNF135P52742 658 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 DAB2P98082 770 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 DPYSQ14117 519 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 PIGHQ14442 188 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 GRM3Q14832 879 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 ACAP1Q15027 740 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 ALKBH5Q6P6C2 394 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 KDM7AQ6ZMT4 941 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 DCP2Q8IU60 420 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 ARHGAP12Q8IWW6 846 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 SLC25A45Q8N413 288 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 LENG8Q96PV6 779 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 KLF6Q99612 283 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 CPEB1Q9BZB8 566 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 SUV39H2Q9H5I1 410 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 DKK3Q9UBP4 350 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 IP6K2Q9UHH9 426 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 FRYQ5TBA9 3013 aa12.84□□□□□ -0.35
NPLOC4-213ENST00000573519 CHD5Q8TDI0 1954 aa12.83□□□□□ -0.35
NPLOC4-213ENST00000573519 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.35
NPLOC4-213ENST00000573519 CEP295Q9C0D2 2601 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 H3BM21 787 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 TRIM38O00635 465 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 SIGLEC6O43699 453 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 PIAS2O75928 621 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 CYP1A2P05177 515 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 RARAP10276 462 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 ALPPL2P10696 532 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 CKMT2P17540 419 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 AMPD1P23109 780 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 SERPINA4P29622 427 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 GJC1P36383 396 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 RGRP47804 291 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 HCAR3P49019 387 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 THOP1P52888 689 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 ADKP55263 362 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 CLDN6P56747 220 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 IL10RBQ08334 325 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 ELP6Q0PNE2 266 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 FZD2Q14332 565 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 KRT81Q14533 505 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 DPYSL2Q16555 572 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 AFMIDQ63HM1 303 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 ERAP2Q6P179 960 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 SRLQ86TD4 932 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 PARGQ86W56 976 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 CAMK1DQ8IU85 385 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 TP53INP2Q8IXH6 220 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 LZTR1Q8N653 840 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 DENND6BQ8NEG7 585 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 OR8K1Q8NGG5 319 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 C1QTNF7Q9BXJ2 289 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 DEF6Q9H4E7 631 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 CCDC86Q9H6F5 360 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 ATP13A3Q9H7F0 1226 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 COQ6Q9Y2Z9 468 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 PCDHGA1Q9Y5H4 931 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 AKAP13Q12802 2813 aa12.83□□□□□ -0.36
NPLOC4-213ENST00000573519 PCNX2A6NKB5 2137 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 KMT2BQ9UMN6 2715 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 SPTY2D1-AS1A0A0U1RR47 76 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 NEMP2A6NFY4 417 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 SRRM3A6NNA2 597 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 MYO1FO00160 1098 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 PRKCGP05129 697 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 C1SP09871 688 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 JUPP14923 745 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 HNRNPH3P31942 346 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 HNF1BP35680 557 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 SCNN1BP51168 640 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 SUOXP51687 545 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 HNRNPKP61978 463 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 SEMG2Q02383 582 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 BCL2L1Q07817 233 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 ZNF211Q13398 564 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 TRIM14Q14142 442 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 ZNF235Q14590 738 aa12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 RFTN1Q14699 578 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 LBRQ14739 615 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-213ENST00000573519 SMAD1Q15797 465 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms