RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CASP14P31944 242 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 ARRB1P49407 418 aaPredicted RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 PAPOLAP51003 745 aaKnown RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 PFN3P60673 137 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 RPS21P63220 83 aaKnown RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 SLC25A11Q02978 314 aaKnown RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 TRIM14Q14142 442 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 FZD2Q14332 565 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 DPYSL2Q16555 572 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 FBXL19Q6PCT2 694 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 GDPD4Q6W3E5 623 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 ZSCAN30Q86W11 494 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 CPLX3Q8WVH0 158 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 RAB7BQ96AH8 199 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 LENG8Q96PV6 779 aaPredicted RBP17.53■□□□□ 0.4
SMG6-212ENST00000573153 DNAJC7Q99615 494 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 OSBPL1AQ9BXW6 950 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 TSPY26PQ9H489 355 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 MYO1AQ9UBC5 1043 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 FTSJ1Q9UET6 329 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 KLF15Q9UIH9 416 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 HS3ST3A1Q9Y663 406 aa17.53■□□□□ 0.4
SMG6-212ENST00000573153 LAMA5O15230 3695 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 LY6G6EA0A0G2JKS1 128 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 TSPAN6O43657 245 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 AKT2P31751 481 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 IGFALSP35858 605 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 RHOAP61586 193 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 PIGHQ14442 188 aaPredicted RBP17.52■□□□□ 0.4
SMG6-212ENST00000573153 ASTE1Q2TB18 679 aaPredicted RBP17.52■□□□□ 0.4
SMG6-212ENST00000573153 SPECC1LQ69YQ0 1117 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 ALKBH5Q6P6C2 394 aaKnown RBP17.52■□□□□ 0.4
SMG6-212ENST00000573153 TP53I13Q8NBR0 393 aaPredicted RBP17.52■□□□□ 0.4
SMG6-212ENST00000573153 CENPTQ96BT3 561 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 BTBD6Q96KE9 485 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 CNDP2Q96KP4 475 aaKnown RBP17.52■□□□□ 0.4
SMG6-212ENST00000573153 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMG6-212ENST00000573153 CPEB1Q9BZB8 566 aaKnown RBP17.52■□□□□ 0.4
SMG6-212ENST00000573153 UBA2Q9UBT2 640 aaPredicted RBP17.52■□□□□ 0.4
SMG6-212ENST00000573153 PCDHGA1Q9Y5H4 931 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 U3KQA8 63 aa17.52■□□□□ 0.4
SMG6-212ENST00000573153 CELSR3Q9NYQ7 3312 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 GOLGA8CPA6NN73 597 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 SRRM3A6NNA2 597 aaPredicted RBP17.51■□□□□ 0.39
SMG6-212ENST00000573153 A6NNZ2 444 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 MAGEC1O60732 1142 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 PIAS2O75928 621 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 IGSF6O95976 241 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 DGKAP23743 735 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 IL4RP24394 825 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 INAVAQ3KP66 663 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 BOLA3Q53S33 107 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 DHRS13Q6UX07 377 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 Q6ZSR6 202 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 PKD1L2Q7Z442 2459 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 POLNQ7Z5Q5 900 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 RYBPQ8N488 228 aaPredicted RBP17.51■□□□□ 0.39
SMG6-212ENST00000573153 TSEN2Q8NCE0 465 aaKnown RBP17.51■□□□□ 0.39
SMG6-212ENST00000573153 DENND6BQ8NEG7 585 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 FAM71BQ8TC56 605 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 ZCCHC14Q8WYQ9 949 aaKnown RBP17.51■□□□□ 0.39
SMG6-212ENST00000573153 ECHDC3Q96DC8 303 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 FEM1CQ96JP0 617 aa17.51■□□□□ 0.39
SMG6-212ENST00000573153 SPTY2D1-AS1A0A0U1RR47 76 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 LDOC1O95751 146 aaPredicted RBP17.5■□□□□ 0.39
SMG6-212ENST00000573153 RARAP10276 462 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 GM2AP17900 193 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 ARSEP51690 589 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
SMG6-212ENST00000573153 SMTNL2Q2TAL5 461 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 TMEM52BQ4KMG9 183 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 PROSER1Q86XN7 944 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 VSTM4Q8IW00 320 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 TEKT4Q8WW24 435 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 IFT43Q96FT9 208 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 CALN1Q9BXU9 219 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 PCDH18Q9HCL0 1135 aa17.5■□□□□ 0.39
SMG6-212ENST00000573153 MBNL1Q9NR56 388 aaKnown RBP17.5■□□□□ 0.39
SMG6-212ENST00000573153 CHD6Q8TD26 2715 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 LRP4O75096 1905 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 SSU72P8A0A1W2PR75 194 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 FAM149AA5PLN7 773 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 ARHGAP42A6NI28 874 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 TRAFD1O14545 582 aaPredicted RBP17.49■□□□□ 0.39
SMG6-212ENST00000573153 SIGLEC6O43699 453 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 NME1P15531 152 aaKnown RBP17.49■□□□□ 0.39
SMG6-212ENST00000573153 CR2P20023 1033 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 CSNK1DP48730 415 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 RALGDSQ12967 914 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 EIF2B5Q13144 721 aaKnown RBP17.49■□□□□ 0.39
SMG6-212ENST00000573153 SLC18A3Q16572 532 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 ZNF542PQ5EBM4 170 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 PPP6R3Q5H9R7 873 aaPredicted RBP17.49■□□□□ 0.39
SMG6-212ENST00000573153 CCDC122Q5T0U0 273 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 NYAP1Q6ZVC0 841 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 LZTR1Q8N653 840 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 OR8K1Q8NGG5 319 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 OR4C6Q8NH72 309 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 FAM174AQ8TBP5 190 aa17.49■□□□□ 0.39
SMG6-212ENST00000573153 HCAR2Q8TDS4 363 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms