RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PIWIL4Q7Z3Z4 852 aaKnown RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 GAB3Q8WWW8 586 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 KCTD13Q8WZ19 329 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 PHF21BQ96EK2 531 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 FICDQ9BVA6 458 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 MROH8Q9H579 483 aa17.63■□□□□ 0.41
SCARF1-205ENST00000571272 UTP6Q9NYH9 597 aaKnown RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 SUCOQ9UBS9 1254 aaKnown RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 TIMM13Q9Y5L4 95 aaPredicted RBP17.63■□□□□ 0.41
SCARF1-205ENST00000571272 CROCCQ5TZA2 2017 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 NPHS1O60500 1241 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 GPC4O75487 556 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 PNPLA4P41247 253 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 GALK1P51570 392 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 SLC12A2P55011 1212 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 ZNF419Q96HQ0 510 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 VAT1Q99536 393 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 TBL1YQ9BQ87 522 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 MRPL57Q9BQC6 102 aaKnown RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 SIK2Q9H0K1 926 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 CNOT11Q9UKZ1 510 aaKnown RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 RAD54BQ9Y620 910 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 TIPRLO75663 272 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 H6PDO95479 791 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 C8BP07358 591 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 ARCN1P48444 511 aaKnown RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 SCAPQ12770 1279 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 RBM20Q5T481 1227 aaKnown RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 LINC00523Q86TU6 105 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 TMEM40Q8WWA1 233 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 RNF34Q969K3 372 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 RSL24D1Q9UHA3 163 aaKnown RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 A0A0J9YVX5 310 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 ZNF839A8K0R7 811 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 BTBD19C9JJ37 291 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 PMPCBO75439 489 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 ATP5F1P24539 256 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-205ENST00000571272 HCAR3P49019 387 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 SCNN1BP51168 640 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 PRAMEP78395 509 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 SEPT6Q14141 434 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 BORAQ6PGQ7 559 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 ARRDC4Q8NCT1 418 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 HAUS8Q9BT25 410 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 OSBPL11Q9BXB4 747 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 BRD8Q9H0E9 1235 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 SPAG4Q9NPE6 437 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 CRTAC1Q9NQ79 661 aa17.62■□□□□ 0.41
SCARF1-205ENST00000571272 TRIM24O15164 1050 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 ZNF23P17027 643 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 WARSP23381 471 aaKnown RBP17.61■□□□□ 0.41
SCARF1-205ENST00000571272 YWHAQP27348 245 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 CHRNA4P43681 627 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 NDST2P52849 883 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 TXNL4AP83876 142 aaKnown RBP17.61■□□□□ 0.41
SCARF1-205ENST00000571272 CREB5Q02930 508 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 ZNF789Q5FWF6 425 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 HMBOX1Q6NT76 420 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 CARM1Q86X55 608 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 ABTB1Q969K4 478 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-205ENST00000571272 SMOQ99835 787 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 TIMMDC1Q9NPL8 285 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 OLAHQ9NV23 265 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 THEGQ9P2T0 379 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 ADRM1Q16186 407 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 CLEC6AQ6EIG7 209 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 ZBTB49Q6ZSB9 765 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 LPCAT2Q7L5N7 544 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 CUZD1Q86UP6 607 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 ERO1BQ86YB8 467 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 FBRSL1Q9HCM7 1045 aaKnown RBP17.61■□□□□ 0.41
SCARF1-205ENST00000571272 PADI4Q9UM07 663 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 MYRFQ9Y2G1 1151 aa17.61■□□□□ 0.41
SCARF1-205ENST00000571272 MYBPHLA2RUH7 354 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 MRASO14807 208 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 DARSP14868 501 aaKnown RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 CD151P48509 253 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 ADARP55265 1226 aaKnown RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 TMED1Q13445 227 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 DENND5AQ6IQ26 1287 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 CHSY3Q70JA7 882 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 LIMS2Q7Z4I7 341 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 PPHLN1Q8NEY8 458 aaKnown RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 DPF3Q92784 378 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 RHOBTB2Q9BYZ6 727 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 IL1RL2Q9HB29 575 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 CNOT6Q9ULM6 557 aaKnown RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 H3BNH8 94 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 SLC7A2P52569 658 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 AIF1P55008 147 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 NME5P56597 212 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 DCTN2Q13561 401 aaKnown RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 SQLEQ14534 574 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 NOMO2Q5JPE7 1267 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 INTS6LQ5JSJ4 861 aaKnown RBP17.6■□□□□ 0.41
SCARF1-205ENST00000571272 CNTN4Q8IWV2 1026 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 ZMIZ2Q8NF64 920 aa17.6■□□□□ 0.41
SCARF1-205ENST00000571272 DIS3LQ8TF46 1054 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms